Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1139 ATGGAAATCACTAGTTCAGTTTTCTGGCTTCTGGGTTTGCTGCTTCTGGCGTTGATTGAGATATCTTCTGCCGCGCTTTCTCCTTCCGGAATAAATTATGAAGTTGTAGCTCTGATGGCTATAAAAAATGAACTACATGATCCCCACAGTGTCCTGGACAGTTGGGATATTAATTCTGTCGATCCTTGCAGCTGGAGGATGATTACTTGTTCCCCAGATGGTTATGTTTCTGCTCTGGGATTGCCCAGTCAGAACTTGTCTGGTAAACTATCTCCTGGGATTGGAAACCTGACTAACTTGCAATCTGTGTTGCTTCAGAACAATGCCATATCTGGTTCAATTCCTGAAGCTATAGGAAAGCTTGAAAAGTTACAGACACTTGATCTATCCAATAATGAATTTAGTGGTGAGATACCTAGTTCTCTGGGGAACCTCAAGAACCTGAATTATCTGAAGCTGAACAATAACAGCCTTTCAGGAGCCTTCCCTCAGTCTCTTGGCAACAGTGAAGGTCTAACCCTTGTGGATCTCTCCTATAACAATCTGAGTGGTTCATTGCCAAGAATATCAGCAAGAACATTCAACATTGTAGGGAACCCTTTAATTTGTGGTCCAAGTGCTAATAACTGCTCTAATGTTCTGCCGGAACCACTTTCCTTTCCGCCAGATTCTTTAAGAGCCCAATCAGCCTCTGGGACAAAAAGTCATCATATTGCAGTTGCTTTTGGAGCAAGTTTTGGAGCTGCTTTTGTGATTGTTGCTATCATTGTTTTTATTGTTTGGTTGCGGTACAGACACAGCAAACAGATATTCTTTGATGTTAATGAGCAATATGATCCAGAGGTGCGCCTTGGCCATTTGAGAAGGTATACATTTAAGGAGCTTCGAGCTGCAACAGATCATTTCAATTCAAAGAACATTCTGGGAAGGGGTGGCTTTGGAATAGTCTACAAGGGGTGCTTCAATGATGGCTCTGTTGTAGCAGTTAAAAGGTTGAAGGACTATaatgctggtggtggtgagatCCAATTCCAGACAGAAGTTGAGACCATAGGTTTGGCTGTCCACCGGAATCTCCTGAGACTTTGCGGGTTTTGCAGTACTCAAAATGAAAGGCTCCTTGTTTATCCTTACATGCCCAATGGCAGTGTGGCCTCTCGATTAAAAGAATACTTATCTACAGGTCAGTCATCTGAAAAAACCGATGTATTCGGGTTTGGAATCTTGCTGCTTGAGCTGATCACAGGTCAGAAGGCTTTGGATTTTGGACGAGCAGCAAATCAGAAAGGTGTAATGCTTGATTGGGTTAAGAAGCTGCATCAAGAAGGAAGATTAAGTCAAATGGTTGATAAAGATTTGAAGGGCAACTTTGATGCAGATGAACTGGAAGAAATGGTTCAAGTTGCTCTATTGTGTACACAATTTACTCCTTTGCACCGGCCCAAGATGTCAGAAGTATTGAAGATGTTGGAAGGCGATGGCTTAGCCGAGAGGTGGGAGGAGGCGTCACAGAAGGCGGACACACCTAGATTTAGGTCGTGTGAGAACCCTCCTCAAAGATACTCAGATTTTATAGAAGAATCTTCACTGATAGTTGAAGCTATGGAGCTTTCTGGCCCTAGGTGA 1626 0.4244 MEITSSVFWLLGLLLLALIEISSAALSPSGINYEVVALMAIKNELHDPHSVLDSWDINSVDPCSWRMITCSPDGYVSALGLPSQNLSGKLSPGIGNLTNLQSVLLQNNAISGSIPEAIGKLEKLQTLDLSNNEFSGEIPSSLGNLKNLNYLKLNNNSLSGAFPQSLGNSEGLTLVDLSYNNLSGSLPRISARTFNIVGNPLICGPSANNCSNVLPEPLSFPPDSLRAQSASGTKSHHIAVAFGASFGAAFVIVAIIVFIVWLRYRHSKQIFFDVNEQYDPEVRLGHLRRYTFKELRAATDHFNSKNILGRGGFGIVYKGCFNDGSVVAVKRLKDYNAGGGEIQFQTEVETIGLAVHRNLLRLCGFCSTQNERLLVYPYMPNGSVASRLKEYLSTGQSSEKTDVFGFGILLLELITGQKALDFGRAANQKGVMLDWVKKLHQEGRLSQMVDKDLKGNFDADELEEMVQVALLCTQFTPLHRPKMSEVLKMLEGDGLAERWEEASQKADTPRFRSCENPPQRYSDFIEESSLIVEAMELSGPR 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1139 541 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Sto11g1139 541 Gene3D Phosphorylase Kinase; domain 1 271 378 - -
Sto11g1139 541 ProSiteProfiles Protein kinase domain profile. 302 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1139 541 Gene3D Transferase(Phosphotransferase) domain 1 387 493 - -
Sto11g1139 541 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 390 541 - -
Sto11g1139 541 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 391 - -
Sto11g1139 541 Gene3D Ribonuclease Inhibitor 31 212 IPR032675 -
Sto11g1139 541 PANTHER PROTEIN NSP-INTERACTING KINASE 3 6 391 - -
Sto11g1139 541 PANTHER PROTEIN NSP-INTERACTING KINASE 3 390 541 - -
Sto11g1139 541 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Sto11g1139 541 SUPERFAMILY Protein kinase-like (PK-like) 286 494 IPR011009 -
Sto11g1139 541 Pfam Protein kinase domain 303 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1139 541 SUPERFAMILY L domain-like 32 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1139 Sto-Chr11 11384624 11389177 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1139 382 541 Receptor kinase-like Gene Family AT5G16000 65.269 1.44e-63 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Sto11g1139 Pkinase 1.5e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1139 - - gmx:100806943 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1139 11 11384624 11389177 Sto11g1139 11 11384624 11389177 ECH