Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1117 ATGAGCAAAGCagataagaaaaatgagtacAAGAAGGGGCTATGGACGCAGGAGGAAGACAAGATTTTGATACAATACATCAACCTCCATGGAAGAACTCACTGGAATCGCATTTCAAAACTCACtgGGAGGGTACCAGGAAGAACAGACAACCAAGTGAAGAACCATTGGAACACTCATTTGTGCAAGAAGGTTGGTATCACTAAGCACCAAACTTCAAAACTTAAGGACAGGGTACCCTCAAAACCAAGGGCTTCTTCACATATGCAAATATTGGAAGTCACTCCAAATAATGTGGATATCACTCTCACTGCTCAACACAAACACGCTGAAATTTCTATTCAACCCCAAGGAAGCAGCTCTTTGGATAACATTAATATTGATGCACCACAACTACAAATAAAAGACCACTTTGATTATCACCAaaattttctatttgaatttgatGCTCATCATAATTTTGTTTTCGATAGCCCTCCAAGGTTAATGGAACTCTTTGATGGCTTTGATGTAATATAA 519 0.368 MSKADKKNEYKKGLWTQEEDKILIQYINLHGRTHWNRISKLTGRVPGRTDNQVKNHWNTHLCKKVGITKHQTSKLKDRVPSKPRASSHMQILEVTPNNVDITLTAQHKHAEISIQPQGSSSLDNINIDAPQLQIKDHFDYHQNFLFEFDAHHNFVFDSPPRLMELFDGFDVI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1117 172 CDD SANT 15 61 IPR001005 -
Sto11g1117 172 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 42 167 - -
Sto11g1117 172 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 6 43 - -
Sto11g1117 172 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 65 IPR017930 -
Sto11g1117 172 ProSiteProfiles Myb-like domain profile. 7 61 IPR001005 -
Sto11g1117 172 SMART sant 11 63 IPR001005 -
Sto11g1117 172 PANTHER TRANSCRIPTION FACTOR MYB114-LIKE 42 167 - -
Sto11g1117 172 PANTHER TRANSCRIPTION FACTOR MYB114-LIKE 6 43 - -
Sto11g1117 172 Pfam Myb-like DNA-binding domain 12 61 IPR001005 -
Sto11g1117 172 Gene3D - 14 90 - -
Sto11g1117 172 SUPERFAMILY Homeodomain-like 8 64 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1117 Sto-Chr11 11214057 11217528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1117 1 158 MYB Transcription Factor Family AT5G40330 30.918 7.75e-24 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto11g1117 Myb_DNA-binding 2.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1117 K09422 - ath:AT5G40330 93.5893