Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1116 ATGTCTGCCTCTCCCACACTCTCCTCCACCACAACTTCCTTCACTCCACTTTCTCGCAGGTTTTCCCTCACTTTCCGGCAAAATTCAAACCCAACCACCTCTTTTCCTCGGAAACGACCACTCGTTAAAATCCCACGTACGAGGAGAGTGGTTGTGGTGAAGTCGCAGGCTACAGCTCCTGCTTCGTCGGAGGCTGTGGAATTGACGGGAATAGCCTCGGAAATGAAGGCGTGGGTTTATGGAGAGTATGGAGGCGTTGATGTATTGAAGTTGGATTCGAATGTGGGAGTTCCGGAGGTGAAGGAGGATCAGCTTCTGCTTAAGGTTGTTGCTGCGGCTCTTAATCCTGTCGATGGTAAGAGGAGGCAGGGCAAGTTCAAAGCCACTGATTCTCCACTTCcgACTGTACCGGGATACGATGTTGCTGGTGTGGTAGTAAAGGTTGGGAGTGAGGTGAAAGATTTCAAAGTGGGCGATGAAGTGTATGGGAATGTGAATGAGAAAGCATTAGAAGGGCCTAAACAGTTTGGTTCACTAGCAGAGTACACAGCTGTTGAACCAAAATTGTTAGCTCCAAAACCTAAGAATTTGAGTTTTGCTGAGGCTGCTGGTCTCCCTCTTGCAATTGAAACTGCCTATGAGGGTTTGGAGAGAACTGGGTTTTCTGCTGGAAAATCTATTCTTGTTCTTAATGGTTCGGGTGGAGTTGGAAGCCTAGTGATTCAGCTAGCTAAGCAAGTTTTTGGAGCTTCAAGAGTTGCTGCCACTTCAAGCACTAGAAATTTGGAGCTGCTGAAGAGCTTGGGAGCTGATTTGGCTATTGACTACACGAAGGAGAACTTCGAAGATTTGCCGGAAAAATTCGATGTAGTTTACGATGCCATCGGGCAATGTGAGAGGGCAGTGAAGGTAGTGAAAGAAGGTGGGAGTGTGGTGGCACTAACAGGTGCAGTTACAGCTCCAGGGTTCAGGTTTGTGGTGACATCCAATGGACAAGTTCTGAGGAAGTTGAATCCATTCTTAGAAAGTGGAAAAGTGAAGGCAATTGTTGACCCAAAAGGCCCATTCCCATTTTCCCAGGTTGTTGAGGCCTTCTCTTACCTTGAAACAAACAGAGCAGTTGGAAAGGTTGTTATTCATCCAATCCCATGA 1152 0.4705 MSASPTLSSTTTSFTPLSRRFSLTFRQNSNPTTSFPRKRPLVKIPRTRRVVVVKSQATAPASSEAVELTGIASEMKAWVYGEYGGVDVLKLDSNVGVPEVKEDQLLLKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSEVKDFKVGDEVYGNVNEKALEGPKQFGSLAEYTAVEPKLLAPKPKNLSFAEAAGLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCERAVKVVKEGGSVVALTGAVTAPGFRFVVTSNGQVLRKLNPFLESGKVKAIVDPKGPFPFSQVVEAFSYLETNRAVGKVVIHPIP 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1116 383 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 224 245 IPR002364 GO:0008270|GO:0016491
Sto11g1116 383 CDD MDR_like_2 75 379 - -
Sto11g1116 383 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 39 383 IPR044626 GO:0016628
Sto11g1116 383 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 39 383 - -
Sto11g1116 383 Gene3D - 82 379 - -
Sto11g1116 383 SUPERFAMILY GroES-like 74 229 IPR011032 -
Sto11g1116 383 SMART PKS_ER_names_mod 84 379 IPR020843 GO:0016491
Sto11g1116 383 Pfam Zinc-binding dehydrogenase 268 379 - -
Sto11g1116 383 Gene3D - 216 330 - -
Sto11g1116 383 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 197 319 IPR036291 -
Sto11g1116 383 Pfam Alcohol dehydrogenase GroES-like domain 103 165 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1116 Sto-Chr11 11206618 11208502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1116 103 295 Monolignol Biosynthesis Gene Families AT3G19450 25.561 1.32e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1116 K18980 - gmx:100810816 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1116 11 11206618 11208502 Sto11g1116 11 11206618 11208502 ECH