Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1106 ATGTTATTTTCAGGTGTAGTGGGTTGTTGTTTTGGCTTTAAACTGCTTTTAGTGCCATTCATTAACCCTATTTCTGACGCATCTTCAGGTGGGAATGGCTACCTCAGTAGAGGGCTGGTCAGTAAGTACAGTACTACTGCTGCTGCTGCAATTGAAGAACCAATTAAGCCAAAAGTTCAAGTAGAATATACGCAGCTCTTAATCGATGGGAAATTCGTGGATTCTGCCTCTGGCAAAACTTTTCCAACGTTGGACCCTAGGACAGGGGAAGTAATTGCACATGTTGCTGAGGGTGACCATGAAGATGTAGATCGAGCTGTTGTAGCTGCACGCAAGGCATTTGATGAAGGGCCTTGGCCAAGGATGACAGCCTATGAAAGGCAGAAGATACTATTGCGTGCTGCTGACCTGATTGAGAAGCATAATGATGAGCTTGCAACACTTGAGACTTGGGATAATGGGAAGCCATATGCACAAGCTGCTCAAATTGAAGTTCCTATGCTGGTTCGTCTAATTCGATATTATGCTGGGTGGACAGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGACCACATCATGTGCAAACATTGCATGAACCAATTGGTGTTGCTGGTCAGATCATTCCATGGAATTTCCCTCTTCTCATGTTTGCCTGGAAGATTGGGCCTGCATTAGCCTGTGGCAACACTGTTGTAATGAAAACAGCTGAACAAACGCCATTATCTGCTTTATATGCAGCAAAGTTATTCCATGAGGCTGGGCTTCCCCCTGGTGTTTTAAATGTAGTTTCTGGCTTTGGTCCAACTGCTGGTGCTGCCATTGCTAGTCACATGGATATTGATAAGGCATTAGCTGTTTACTCTGTTTTGGAAGTCAAGCTTGCTTTTACTGGTTCAACTAGCACCGGAAAAGTTGTGCTTGAACTGGCGGCAAAAAGTAATCTCAAGCCTGTTACTTTGGAGCTTGGTGGGAAATCCCCCTTCATTGTATGCGAAGATGCTGATATTGATCAAGCTGTAGAGCTAGCACATTTTGCATTGTTCTTCAATCAGGGACAATGCTGCTGTGCTGGGTCTCGTACATTTGTACATGAAAGCGTATACGATGAGTTTATTGAAAAAGCAAAGGCACGTGCTTTGAAACGTTCTGTTGGTGATCCATTCAAAGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTTGAGAAGATTCTGAAGTATATTAGATCTGGTGTTGAAGGTGGAGCCACCCTTGAAACTGGAGGAGAGAGACATGGAGACAAAGGCTTCTATATCAAGCCTACTGTCTTCACAAATGTTGAGGATAACATGCTGATAGCAAAGGATGAGATATTTGGTCCAGTGCAGTCCATATTGAAATTCAGGGACATCGATGAGGTGATTCGAAGAGCAAACAGCACGCGGTATGGCCTTGCAGCTGGGGTCTTCACGAAGAGTTTAGCCACTGCGAACCTTCTGACTCGAGCCTTGCGAGTAGGGACAGTATGGGTAAACTGCTTTGATACGTTTGATGCTGCAATTCCTTTTGGAGGGTACAAAATGAGTGGACAAGGCAGAGAAAAAGGAATTTATAGTCTTAGAAACTACTTGCAAGTGAAGGCAGTCGTTAGTCCCTTGGAGAAACCAGCATGGCTTTGA 1668 0.443 MLFSGVVGCCFGFKLLLVPFINPISDASSGGNGYLSRGLVSKYSTTAAAAIEEPIKPKVQVEYTQLLIDGKFVDSASGKTFPTLDPRTGEVIAHVAEGDHEDVDRAVVAARKAFDEGPWPRMTAYERQKILLRAADLIEKHNDELATLETWDNGKPYAQAAQIEVPMLVRLIRYYAGWTDKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKIGPALACGNTVVMKTAEQTPLSALYAAKLFHEAGLPPGVLNVVSGFGPTAGAAIASHMDIDKALAVYSVLEVKLAFTGSTSTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADIDQAVELAHFALFFNQGQCCCAGSRTFVHESVYDEFIEKAKARALKRSVGDPFKGGIEQGPQIDSEQFEKILKYIRSGVEGGATLETGGERHGDKGFYIKPTVFTNVEDNMLIAKDEIFGPVQSILKFRDIDEVIRRANSTRYGLAAGVFTKSLATANLLTRALRVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGIYSLRNYLQVKAVVSPLEKPAWL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1106 555 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 32 555 - -
Sto11g1106 555 SUPERFAMILY ALDH-like 59 547 IPR016161 GO:0016491
Sto11g1106 555 CDD ALDH_F2BC 61 546 - -
Sto11g1106 555 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 349 360 IPR016160 GO:0016491
Sto11g1106 555 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 327 516 IPR016163 GO:0016620
Sto11g1106 555 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 321 328 IPR029510 GO:0016491
Sto11g1106 555 Pfam Aldehyde dehydrogenase family 72 545 IPR015590 GO:0016491
Sto11g1106 555 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 32 555 - -
Sto11g1106 555 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 78 545 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1106 Sto-Chr11 11128316 11131982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1106 22 555 Aldehyde Dehydrogenase Gene Family AT3G48000 75.655 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1106 K00128 - gmx:100777399 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1106 11 11128316 11131982 Sto11g1106 11 11128316 11131982 ECH