Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1088 ATGCCTTTTGGGTTGGTCTCAGCCTGGAGCAAGCGAAGGAGAAGCAAATCTCAAGATCATACAGACCCTTGGACATACAAACCTGTGGAGTTTTGGCAACTTGAAGATCATCAACCACTACGGCCGACGAAAAGGCGGCATGGATCATCTGTTTTCACGCTCAAGGAGATGGAAGAGGCGACGGGTGCATTCAGTGAAGGTAATCTGCTTGGGAAAGGAGGTTTTGGCAGAGTCTATCGGGGCACTTTGCGCTCAGGAGAGGTAGTAGCAATCAAGAAAATGGAGGTGCCAGCAATTAAAGAAGCAGAAGGAGAGCGTGAATTCCGCGTTGAAGTTGATATCTTGAGCAGAATTGACCACCCAAATCTGGTTTCTTTAATAGGCTACTGTGCTGATGGAAAGCACAGATTCCTAGTTTACGAATATATGCATAATGGGAACCTGCAAGATCATTTgaatgGAATTGGGCAAAGAAAAATGGATTGGCCGCAAAGACTCAAAGTGGCACTGGGAGCTGCAAAAGGACTTGCATATCTCCATTCAACTTCTGCTGTCGGAATTCCCATTGTTCACAGAGATTTCAAATCCACCAATGTTCTCCTAGATCTCAACTATGAACCAAAGATATCTGATTTTGGGCTAGCCAAGTTAATGCCAGAAGGGCAGGAGACACATGTCACTGCCAGAGTACTTGGTACATTTGGCTACTTTGATCCTGAGTATACATCGGTGAGGAACATACTGAATGACCGCAAGAAGCTCCGTAAGGTGATAGACCCAGAAATGGCTCGAAATTCTTACACCATTGAGTCTGTAGTTATGTTTGCCAATCTGGCATCACGATGTATCCGTACAGACAGTAGTGAGAGACCTTCTATGGCAGAATGTGTAAAAGAGCTGCAAAtgattatatatacaaattcaaaAGGCTTGGCAATGGTTATGCACAGTTTGAGAATGATCTAG 966 0.4379 MPFGLVSAWSKRRRSKSQDHTDPWTYKPVEFWQLEDHQPLRPTKRRHGSSVFTLKEMEEATGAFSEGNLLGKGGFGRVYRGTLRSGEVVAIKKMEVPAIKEAEGEREFRVEVDILSRIDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIGQRKMDWPQRLKVALGAAKGLAYLHSTSAVGIPIVHRDFKSTNVLLDLNYEPKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSVRNILNDRKKLRKVIDPEMARNSYTIESVVMFANLASRCIRTDSSERPSMAECVKELQMIIYTNSKGLAMVMHSLRMI 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1088 321 PANTHER OS01G0750732 PROTEIN 1 244 - -
Sto11g1088 321 PANTHER OS01G0750732 PROTEIN 244 321 - -
Sto11g1088 321 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 244 - -
Sto11g1088 321 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 244 321 - -
Sto11g1088 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Sto11g1088 321 SUPERFAMILY Protein kinase-like (PK-like) 43 303 IPR011009 -
Sto11g1088 321 Gene3D Transferase(Phosphotransferase) domain 1 246 315 - -
Sto11g1088 321 Gene3D Transferase(Phosphotransferase) domain 1 143 245 - -
Sto11g1088 321 Pfam Protein kinase domain 65 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1088 321 Gene3D Phosphorylase Kinase; domain 1 31 142 - -
Sto11g1088 321 ProSiteProfiles Protein kinase domain profile. 64 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1088 321 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1088 Sto-Chr11 10988684 10991331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1088 47 300 Receptor kinase-like Gene Family AT3G58690 39.333 1.78e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Sto11g1088 Pkinase 8.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1088 - - gmx:100796654 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1088 11 10988684 10991331 Sto11g1088 11 10988684 10991331 ECH