Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1079 ATGTCGGCTTCCTGTACCGATTACTTCTCCGACTCTGACCTTCTCTGCAGCGAAGACACCTCCGGAATCTTGTCCGGAGAGTCGCCGGAATGCTCCTCCGATCTCGATTCCCCTCCGTCGTCCACGGATGAGTCGATTGCCGGATTCATCGAACACGAGCACGAATTCGTCCCTGGATTCGACTACTTGTCCAGGTTTCAATCTCACTCGCTTGACGCCTCCGCCAGAGAGGAATCTATTGCATGGATTCTCAAGGTACAATCATACTATGGCTTCCAGCCGCTGACGGCGTATCTTTCAGTCAACTACATGGATCGGTTTTTGGATTCTTGGCGGTTGCCGCAAACAAATGGTTGGCCACTGCAACTTCTGTCCGTTGCTTGTTTGTCTTTAGCTGCAAAGATGGAGGAACCTTTAGTTCCATCCCTTTTGGATCTTcagGTAGAAGGTgcgaaatatatatttgaaccgAAAACAATTCGTAGGATGGAACTACTTGTTCTGGGTGTTTTGGATTGGAGACTAAGATCAATCACGCCTTTCAGCTTCCTAGATTACTTTGCGTGCAAGCTCGATTCAACAGGAACTTTTACTGGGTTCCTCATTTCACGGGCCACAGAAATCATATCATCTAACATCCAAGATGTTAGTTTTCTGGCGTACTGGCCATCGTGCATTGCTGTCGCGTCTATACTCTGTGCAGCGAATGAAATTCCCAATTGGTCTTTCGTCAAGCCTGAGCACGCTGAATCATGGTGTGAAGGGCTTAGAAAAGAGAAGATTATAGAGTGCTATCAGTTGATGCAAGAATTTGTGATTAACAATAATCAGAGGAAGCCCTCTAAAATGTTCCCACAGCTTCGAGGAGAGAGGAAAGAGATCAGAAAAGACGCATTAAATGGTTTGGCTATTCAAGTATCGAAGAAGTGGGGAATTGAATTCAAAGGTGGCATTGATTACTTGTTAAAAGGAAGGAGATGGTGGGACACTAATCTATTGCTTGAAAAAGAAAAGCAGATAGATAGCAGAAATCAAATGGATTGGCATACTTAA 1053 0.4416 MSASCTDYFSDSDLLCSEDTSGILSGESPECSSDLDSPPSSTDESIAGFIEHEHEFVPGFDYLSRFQSHSLDASAREESIAWILKVQSYYGFQPLTAYLSVNYMDRFLDSWRLPQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPKTIRRMELLVLGVLDWRLRSITPFSFLDYFACKLDSTGTFTGFLISRATEIISSNIQDVSFLAYWPSCIAVASILCAANEIPNWSFVKPEHAESWCEGLRKEKIIECYQLMQEFVINNNQRKPSKMFPQLRGERKEIRKDALNGLAIQVSKKWGIEFKGGIDYLLKGRRWWDTNLLLEKEKQIDSRNQMDWHT 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1079 350 SUPERFAMILY Cyclin-like 160 276 IPR036915 -
Sto11g1079 350 MobiDBLite consensus disorder prediction 25 44 - -
Sto11g1079 350 Pfam Cyclin, N-terminal domain 48 175 IPR006671 -
Sto11g1079 350 SMART Cyclin_C_2 178 300 IPR004367 -
Sto11g1079 350 SUPERFAMILY Cyclin-like 39 175 IPR036915 -
Sto11g1079 350 Pfam Cyclin, C-terminal domain 178 288 IPR004367 -
Sto11g1079 350 ProSitePatterns Cyclins signature. 76 107 IPR006671 -
Sto11g1079 350 SMART cyclin_7 81 169 IPR013763 -
Sto11g1079 350 PANTHER CYCLINS 1 295 IPR039361 -
Sto11g1079 350 Gene3D - 50 264 - -
Sto11g1079 350 Gene3D - 59 176 - -
Sto11g1079 350 CDD CYCLIN 80 168 IPR013763 -
Sto11g1079 350 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1079 Sto-Chr11 10935394 10938409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1079 10 288 Core Cell Cycle Gene Families AT1G70210 65.018 9.81e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1079 K18810 - gmx:100775224 473.781