Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1071 ATGCCCACGGGTCGATCGAAATCGGAGAAGCGCGATTCTGTAATGCAGCTACGGAGGGATCCCTATGAGGTTCTGGGCGTCCTGCGCAACTCAACGGATCAAGAGATTAAAACCGCTTACCGAAAAATGGCACTCAAATATCATCCTGACAAGAATGATAACGATCCCAAAGCAGCTGATATGTTTAAAGAGGTCACTTTTTCATACAATATCTTGTCAGATCCTGAAAAACGCCGCCAGTATGACTCAGCTGGTTTTGAGGCTGTTGAATCGGATAGCCAAGATTTGGAACTGGATCTGTCAAGTTTAGCATTAAGAAGAGCAATTTCCTTTGTTTTGAATGCTTCCCCTCCTTTCTCTGTCTCCACCTTTTCATCCTCATTTTTCTTCATACATGCTAGTAAACTGGGTGTGCCAATTAAGACAACTGTATCGGCAACTGTTTTGGAAGAGGCACTTAATGGGGCAGTGATCATTCGTCCACTTCCTTTGGGGCTTTCTATATCCAAACGAGTTGAGAAGCAATCTGCTCACTTTTATTCAGTTACATTAACAGAAGAGGAAGCACAGGCTGGATTTGTTTGTCGAGTGCAATCATCAGACAAAAGCAAATTCAAGttattatattttgatcaaGAAGATACTGGTGGATTAAATCTTTCACTCCAGGAAGACAGTGCAAAAACAGGGAAGGTAACTTCCGCTGGAATGTATTTTCTTAGGTTTCCTGTTTATCACATGAACCAAACGACGAACTCAAGAGCTGCTGCTAAGGATCCAGATACATCATTTTTCCGAAAGCTGGATGGGTTCCACCCATGTGAACTAACAGAATTAAAGGCTGGTACCCATGTCTTTGCAGTTTATGGTGACAATTTCTTCAAAAGTGCAAGCTATACAATAGAAGCTTTATGTGCTGCATCttttaaacaagaaaaagaagatcTACAAAATGTAGAGGCTCAAATTCTATCTAAAAGGGCGGAACTACCAAAGTTTGAGACTGAATACCGAGAGGTTCTGGCACAATTTACAGAGATGACAAGCAGATATATGCAAGAAATGCAAGTGATTGATGAGCTACTGAAGCAAAGGAATGAAATACATGCATCATATACTATTGCTCCATTAAAACGAAGTGCAAGTACGAGAAGGAGTAAAAGTTCTTGTAAGGAGGCAAAAGAAGATGACCAAGGAAGAGAGAAGAGGTATACAAGAGACCgattgaagaaaaagaaatggtaCAACATCCACTTAAAAGTCGACAAGAGAAAAGCTTGCTAA 1284 0.3949 MPTGRSKSEKRDSVMQLRRDPYEVLGVLRNSTDQEIKTAYRKMALKYHPDKNDNDPKAADMFKEVTFSYNILSDPEKRRQYDSAGFEAVESDSQDLELDLSSLALRRAISFVLNASPPFSVSTFSSSFFFIHASKLGVPIKTTVSATVLEEALNGAVIIRPLPLGLSISKRVEKQSAHFYSVTLTEEEAQAGFVCRVQSSDKSKFKLLYFDQEDTGGLNLSLQEDSAKTGKVTSAGMYFLRFPVYHMNQTTNSRAAAKDPDTSFFRKLDGFHPCELTELKAGTHVFAVYGDNFFKSASYTIEALCAASFKQEKEDLQNVEAQILSKRAELPKFETEYREVLAQFTEMTSRYMQEMQVIDELLKQRNEIHASYTIAPLKRSASTRRSKSSCKEAKEDDQGREKRYTRDRLKKKKWYNIHLKVDKRKAC 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1071 427 Pfam DnaJ domain 20 82 IPR001623 -
Sto11g1071 427 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 1 426 - -
Sto11g1071 427 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Sto11g1071 427 Coils Coil 309 336 - -
Sto11g1071 427 Gene3D DnaJ domain 4 103 IPR036869 -
Sto11g1071 427 CDD DnaJ 20 74 IPR001623 -
Sto11g1071 427 MobiDBLite consensus disorder prediction 385 404 - -
Sto11g1071 427 ProSiteProfiles dnaJ domain profile. 20 85 IPR001623 -
Sto11g1071 427 SMART dnaj_3 19 77 IPR001623 -
Sto11g1071 427 PANTHER DNAJ DOMAIN-CONTAINING PROTEIN-RELATED 1 426 - -
Sto11g1071 427 SUPERFAMILY Chaperone J-domain 18 88 IPR036869 -
Sto11g1071 427 MobiDBLite consensus disorder prediction 379 405 - -
Sto11g1071 427 PRINTS DnaJ domain signature 22 40 IPR001623 -
Sto11g1071 427 PRINTS DnaJ domain signature 40 55 IPR001623 -
Sto11g1071 427 PRINTS DnaJ domain signature 57 77 IPR001623 -
Sto11g1071 427 PRINTS DnaJ domain signature 77 96 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1071 Sto-Chr11 10872394 10875775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1071 18 83 C2H2 Transcription Factor Family AT1G74250 40.845 6.01e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1071 - - gmx:100800929 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1071 11 10872394 10875775 Sto11g1071 11 10872394 10875775 ECH