Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1062 ATGGAGGGTTGCGATCATCTCTCGCCGGTGGATACTGAAGATGTTCATGTCTTGGCCGTCGATGATAGCCTCGTCGATCGGAAGGTCATCGAGCGCCTTCTCAGGATTTCAGCTTGTAAAGGTGTGTGCGCGCTTTCCTTTCAAGGACAAAATGGGCATTTTTcatttctctgtttttttttttttaatttttggatttttgcAGTTACTGCTGTGGACAGTGGAATGAGAGCTCTGCAATTTTTGGGACTCGACGAGGAGAAATCGGATGCCTTTGATGGTTTAAAGGTGGATCTAATCATCACTGACTACTGTATGCCTGGAATGACCGGCTATGAATtgctcaagaaaatcaagGAATCGTCGGCGTTGAGGGAAATTCCGGTGGTGATTATGTCGTCTGAGAACGTTTTACCGCGTATTTACagGTGCCTGGAGGAAGGAGCAGAGGATTTCATAGTGAAGCCAGTGAAGCTATCTGACGTGAAACGGCTAAGGGATTACATGACGACAAGAGAGGTTAAGGCGGGAATTAGtgaagagagaggaggagagaaTACGAGGATGAATAAAAGAAAGCTGCGAGACACCACCTCTGATCTGGCTTCATCTCCACCGTCGGTATCCTCGTCACTGCTTTCTTCGTCATCGTCACCGTCGGATTCGCCATCCCCCTCATCATCCCCTTCCTCTTCACCCTCATTGCTTGATTCTCCAATCAGACGGCTTAGAATGACCAACACCGCCACCACCACAGATtga 762 0.4396 MEGCDHLSPVDTEDVHVLAVDDSLVDRKVIERLLRISACKGVCALSFQGQNGHFSFLCFFFFNFWIFAVTAVDSGMRALQFLGLDEEKSDAFDGLKVDLIITDYCMPGMTGYELLKKIKESSALREIPVVIMSSENVLPRIYRCLEEGAEDFIVKPVKLSDVKRLRDYMTTREVKAGISEERGGENTRMNKRKLRDTTSDLASSPPSVSSSLLSSSSSPSDSPSPSSSPSSSPSLLDSPIRRLRMTNTATTTD 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1062 253 Gene3D - 15 216 - -
Sto11g1062 253 MobiDBLite consensus disorder prediction 199 253 - -
Sto11g1062 253 CDD REC_typeA_ARR 17 165 - -
Sto11g1062 253 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 66 247 - -
Sto11g1062 253 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 6 40 - -
Sto11g1062 253 MobiDBLite consensus disorder prediction 176 198 - -
Sto11g1062 253 PANTHER TWO-COMPONENT RESPONSE REGULATOR 66 247 IPR045279 GO:0009736
Sto11g1062 253 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 40 IPR045279 GO:0009736
Sto11g1062 253 SMART REC_2 15 166 IPR001789 GO:0000160
Sto11g1062 253 SUPERFAMILY CheY-like 11 163 IPR011006 -
Sto11g1062 253 MobiDBLite consensus disorder prediction 176 253 - -
Sto11g1062 253 Pfam Response regulator receiver domain 68 162 IPR001789 GO:0000160
Sto11g1062 253 ProSiteProfiles Response regulatory domain profile. 16 170 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1062 Sto-Chr11 10795273 10796318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1062 9 241 Response Regulator Gene Family AT1G59940 55.556 1.79e-71 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto11g1062 Response_reg 2.8e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1062 K14492 - tcc:18609348 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1062 11 10795273 10796318 Sto11g1062 11 10795273 10796318 ECH