Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1052 ATGATGCCTCGCACGTGTTCACACTGTGGCAGCAACGACCACAGCTCCCGAGCATGCGCCGACGGCGGCGGGGGCGCGTCCGGCGAGAACGGCATCTTGTTGTTCGGCGTGCGACTCACGCAAGGGAACTCGTTTCGGAAGAGCGCTAGCATGACCGATCTCTCGCAGTACGAGCTGCCGCCGAGCCACGATTCAAACGCCGACGCCGGTTACGCCTCCGACGGCGTCGTTCACGCCTCCGGTCGCAGCCGCGAGCGCAAAAGAGGTGTTCCGTGGACGGAGGAGGAGCATAGGCTATTCCTGTTGGGGCTACAAAAGGTAGGGAAAGGAGATTGGAGAGGGATTTCTAGAAACTTCGTGAAAACTCGGACACCAACTCAGGTGGCGAGTCATGCTCAGAAATACTTCCTCCGCCGCCACAACCCGAACCGGAGACGCCGGAGATCTAGTTTATTTGATATCACCACCGATGCGGTGAAGGAATCGTCCGCCATGATGATGGAAGACGTTGTTGGAGTCCACCATCAAGAACAAGTACCACCGAGATATCCTCATTACGCTGGCTTTGGCGGTTCTAATTTTCCGGTGATTTCACCGTTAGGATTTAAGCCGATAAGGCCTACGCCGATTCTGCCGGTTGCTCCATCGACGTCGAAAATGGCTAATCTAAACTTGAAGGAGAAAGGTCACGTGACTGATCAGTCTCTGGCGCCATTAGAGCTGAAGCTGCCGGCGGCGCCGAGCAAGGAGGCGTCGGCTTTCGAGGTGATTTCAGGGAAGTTGAGCGGTGGTGGAGGGGATAATAGCATGATCAGTGTTGCTTGA 825 0.5612 MMPRTCSHCGSNDHSSRACADGGGGASGENGILLFGVRLTQGNSFRKSASMTDLSQYELPPSHDSNADAGYASDGVVHASGRSRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNPNRRRRRSSLFDITTDAVKESSAMMMEDVVGVHHQEQVPPRYPHYAGFGGSNFPVISPLGFKPIRPTPILPVAPSTSKMANLNLKEKGHVTDQSLAPLELKLPAAPSKEASAFEVISGKLSGGGGDNSMISVA 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1052 274 ProSiteProfiles SANT domain profile. 87 140 IPR017884 -
Sto11g1052 274 Gene3D - 90 141 - -
Sto11g1052 274 Pfam Myb-like DNA-binding domain 91 136 IPR001005 -
Sto11g1052 274 PANTHER TRANSCRIPTION FACTOR KUA1 2 175 - -
Sto11g1052 274 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 87 138 IPR006447 GO:0003677
Sto11g1052 274 SMART sant 88 138 IPR001005 -
Sto11g1052 274 CDD SANT 91 136 IPR001005 -
Sto11g1052 274 SUPERFAMILY Homeodomain-like 86 139 IPR009057 -
Sto11g1052 274 MobiDBLite consensus disorder prediction 1 23 - -
Sto11g1052 274 PANTHER OS01G0187900 PROTEIN 2 175 - -
Sto11g1052 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 140 IPR017930 -
Sto11g1052 274 ProSiteProfiles Myb-like domain profile. 84 136 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1052 Sto-Chr11 10708651 10709674 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto11g1052 Myb_DNA-binding 7.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1052 - - ccaj:109800877 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1052 11 10708651 10709674 Sto11g1052 11 10708651 10709674 ECH