Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1049 CTGCGCGTTTCGGTTCGAAACTCCTTCCCCAGACTTTCACCGGTCGCCGTCGCCGGCCTTCCGATTGGATTGAGCAGCATCAACTGTCTTCGTATCCTCAGAATTGATTGGTTTCGACGTCTCGTTTTTGCATCTTCGTCGATCTGTGTGTATCTTGGAGCTGTGGATCTGAGAGATTTTGTTGAGAGAGGTGTAGGAGTTGTGCAAAACGATGCCGTCTCACGCGGATCTGGACCGTCAGATCGAGCATCTGATGGATTGCAAGCCTCTGCCGGAGGCCGAGGTGAAGACACTGTGCGATCAGGCGAGGGCGATACTGGTGGAGGAATGGAACGTGCAACCGGTGAAATGCCCCGTGACGGTGCTGCAGTATGTGACTTATGTGAAATTTCTTCTGCTTTTGTGATCTGCTCTAGACTTAGAGGAATGATGTGGGAGATAACAACTTCAGTGTTATCAGATTATCGTGGTTACTATTCAGTGGAGACTGTTACATTGTTGGTGGCCTTGAAAGTCCGTTATAGAGATAGAATTACAATTCTCAGAGGAAATCATGAGAGCCGTCAAATTACTCAAGTGTATGGTTTCTATGATGAATGTTTGAGAAAATACGGAAATGCCAATGTCTGGAAGTACTTTACCGACTTATTTGATTATTTACCTCTGACTGCCCTTATTGAGAGTCAGATTTTCTGTTTGCATGGAGGTCTGTCACCTTCTTTGGATACACTGGATAATATCCGGTCCTTGGATCGCATACAGGAGGTTCCGCATGAAGGACCAATGTGCGATCTCTTGTGGTCTGATCCAGATGACCGCTGTGGATGGGGAATATCTCCACGTGGTGCTGGATATACATTTGGACAGGATATAGCTGCTCACTTTAATCATACCAATGGTCTCTCCCTGATATCTAGAGCTCACCAGCTTGTCATGGAAGGTTACAATTGGTGCCAGGAAAAGAATGTTGTGACTGTGTTTAGTGCTCCAAATTACTGTTACCGATGTGGAAATATGGCTGCTATACTGGAAATTGGAGAGAACATGGATCAGAATTTTCTGCAGTTTGATCCAGCACCCCGGCAAATTGAGCCAGACACTACACGCAAGACCCCagattattttttgtaa 1131 0.4571 LRVSVRNSFPRLSPVAVAGLPIGLSSINCLRILRIDWFRRLVFASSSICVYLGAVDLRDFVERGVGVVQNDAVSRGSGPSDRASDGLQASAGGRGEDTVRSGEGDTGGGMERATGEMPRDGAAVCDLCEISSAFVICSRLRGMMWEITTSVLSDYRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRSLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAAHFNHTNGLSLISRAHQLVMEGYNWCQEKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1049 376 ProSitePatterns Serine/threonine specific protein phosphatases signature. 181 186 IPR006186 GO:0016787
Sto11g1049 376 PRINTS Serine/threonine phosphatase family signature 147 174 IPR006186 GO:0016787
Sto11g1049 376 PRINTS Serine/threonine phosphatase family signature 180 204 IPR006186 GO:0016787
Sto11g1049 376 PRINTS Serine/threonine phosphatase family signature 300 320 IPR006186 GO:0016787
Sto11g1049 376 PRINTS Serine/threonine phosphatase family signature 244 271 IPR006186 GO:0016787
Sto11g1049 376 PRINTS Serine/threonine phosphatase family signature 322 338 IPR006186 GO:0016787
Sto11g1049 376 PRINTS Serine/threonine phosphatase family signature 215 241 IPR006186 GO:0016787
Sto11g1049 376 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 152 376 - -
Sto11g1049 376 Pfam Calcineurin-like phosphoesterase 160 309 IPR004843 GO:0016787
Sto11g1049 376 SUPERFAMILY Metallo-dependent phosphatases 156 362 IPR029052 -
Sto11g1049 376 MobiDBLite consensus disorder prediction 72 115 - -
Sto11g1049 376 SMART pp2a_7 117 360 IPR006186 GO:0016787
Sto11g1049 376 Gene3D - 151 376 IPR029052 -
Sto11g1049 376 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-5 CATALYTIC SUBUNIT 152 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1049 Sto-Chr11 10686358 10690601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1049 156 295 Calmodulin-binding Proteins AT5G63870 33.523 6.43e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1049 K04382 - pvy:116136159 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1049 11 10686358 10690601 Sto11g1049 11 10686358 10690601 ECH