Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1045 ATGGATCCGGCTGCTATGAATATGATGAACGAGGGTTCTTTTGCGAACGGGAATGCCAATACGGCGCCGTATAACTTGGCGGAGATCTGGCCGTTTCCGATGAATGGCGGTGCGGGTCTCGGTGAGTCCGGGGGCGGATTGGGTTTGAGGAGGCCTCAGTTCGGGCATAGTTTGGAGCATTTTGGTGATTTTGCATCGGGTCCGAATCAGGATGGACCGGGTAGTGATCCGACCGGTTTGGAGCAGAGAGCGAATGGGATCAATAGGAAGAGGCGCGATTCCGATGATGAATCGGCCAAGGGCGTCTCGAACGGCGACGGTGGCGCCGGCAATAGCAATGGCGTGAATGATGGTGAGGGAAAAAGGCTTAAAACATCAGTGAATAGGAATGAGAGCCGTGATCCTAAAGCTGAAGCAGAAACCAGTTCAGGAAAGCCTGCGGAGCAAAACACTGAGCCAACTCCTGAGCCTCCTAAGCAAGATTATATCCATGTACGAGCCAGAAGGGGTCAAGCTACTGATAGCCACAGTCTAGCTGAAAGAGCCAGGAGGGAAAAGATAAGCGAGAGGATGAAAATTCTTCAGGATTTGGTTCCTGGTTGTAATAAGGTTATAGGGAAAGCGTTGGTCCTTGAtgagataattaattatatccaGTCACTGCAGCGCCAAGTTGAGTTCTTGTCAATGAAGCTTGAAACTGTAAATTCAAGAGTGAGCCCTGGTATTGAAGTCTTTCCTCCTAAAGATTTTGGTCAACAAACATTTGACACAGCTGGGATGGCATTTGGTTCTCAAGCACCGCGAGAGTTTAGCCGAGGTTCATCGCCGGAGTGGTTACATATGCAGATAGGAGGTGGTTTTGAAAGAACATCATAG 879 0.4869 MDPAAMNMMNEGSFANGNANTAPYNLAEIWPFPMNGGAGLGESGGGLGLRRPQFGHSLEHFGDFASGPNQDGPGSDPTGLEQRANGINRKRRDSDDESAKGVSNGDGGAGNSNGVNDGEGKRLKTSVNRNESRDPKAEAETSSGKPAEQNTEPTPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLETVNSRVSPGIEVFPPKDFGQQTFDTAGMAFGSQAPREFSRGSSPEWLHMQIGGGFERTS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1045 292 PANTHER BNAC05G07950D PROTEIN 1 292 - -
Sto11g1045 292 Coils Coil 218 238 - -
Sto11g1045 292 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 221 IPR011598 GO:0046983
Sto11g1045 292 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 292 IPR024097 GO:0006355
Sto11g1045 292 SMART finulus 177 227 IPR011598 GO:0046983
Sto11g1045 292 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 169 238 IPR036638 GO:0046983
Sto11g1045 292 MobiDBLite consensus disorder prediction 42 160 - -
Sto11g1045 292 MobiDBLite consensus disorder prediction 122 141 - -
Sto11g1045 292 MobiDBLite consensus disorder prediction 85 100 - -
Sto11g1045 292 Pfam Helix-loop-helix DNA-binding domain 175 222 IPR011598 GO:0046983
Sto11g1045 292 Gene3D - 168 241 IPR036638 GO:0046983
Sto11g1045 292 CDD bHLH_AtBPE_like 161 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1045 Sto-Chr11 10649780 10652079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1045 1 250 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 56.917 6.64e-76 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto11g1045 HLH 2.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1045 - - mnt:21394273 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1045 11 10649780 10652079 Sto11g1045 11 10649780 10652079 ECH