Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1018 ATGGGAGCTGGAGACTACTACAGGATCCTCAAGGTAAACCGCAATGCCACCGATGAGGAGTTGAAGAAGGCCTACAAGAGATTGGCCATGAAATGGCATCCTGATAAGAATAATCAACCGTCGTTTAAGAAAGAAGAGGCTGAGGCTAAATTCAAGCAGATATCCGAGGCTTACGATGTGCTCAGCGACCACAAGAAGCGTCAGATCTATGATTTCTACGGTCACTATCCCCTCAATTCTGATCGGGTTAACAAGAAGGATGGTAAGAGTGAGGATATTAGGAATCGCAAGTGCCAGAAGGAAGGGGTTGTCGAGACCAAGTTGGCGTTTAGCCTCGAGGAACTGTACAATGGTTGCAAAAGGAAGTTGAAAATCTTGAGGAATGTTCCTGATGAATTTGGTAAGTTAAACACTGTTGAAGAAGTCTTGAAGATTGATATTAAACCTGGTTGGAAGAAGGGGACAAAAATTACTTTTCCTGAGAAAGGAAACCAAGAGCCAGGAAATGCTCCATCTGATCTAATCTTTGTTTTGGATGAGAAGCCTCATGCTTTTTTCAAAAGGCAAGGAAATGATTTGGTGGTCACCCAGAAGATATTACTTCTAGAGGCTCTCGTAGGAAAGACTCTCAACTTGACAACCTTGGATGGAAGATACCTCACAATTGAAGTGACTGACATTGTGGAACCCGGCTATCAGCTGGTAGTCCCAAATGAAGGGATGCCCATTTCAAAGGAACCGGGAAAGAAAGGGAATCTCAGAATTAAGTTTGATGTTATGTTCCCTTCAAGGTTGACCACACAACAGAAATATGATCTGAAAAGGATTCTGGGTGAAGCTGATAGCTAA 849 0.4299 MGAGDYYRILKVNRNATDEELKKAYKRLAMKWHPDKNNQPSFKKEEAEAKFKQISEAYDVLSDHKKRQIYDFYGHYPLNSDRVNKKDGKSEDIRNRKCQKEGVVETKLAFSLEELYNGCKRKLKILRNVPDEFGKLNTVEEVLKIDIKPGWKKGTKITFPEKGNQEPGNAPSDLIFVLDEKPHAFFKRQGNDLVVTQKILLLEALVGKTLNLTTLDGRYLTIEVTDIVEPGYQLVVPNEGMPISKEPGKKGNLRIKFDVMFPSRLTTQQKYDLKRILGEADS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1018 282 SMART dnaj_3 4 66 IPR001623 -
Sto11g1018 282 Pfam DnaJ C terminal domain 104 262 IPR002939 -
Sto11g1018 282 SUPERFAMILY HSP40/DnaJ peptide-binding domain 185 270 IPR008971 GO:0006457|GO:0051082
Sto11g1018 282 CDD DnaJ 5 63 IPR001623 -
Sto11g1018 282 SUPERFAMILY Chaperone J-domain 4 78 IPR036869 -
Sto11g1018 282 ProSiteProfiles dnaJ domain profile. 5 74 IPR001623 -
Sto11g1018 282 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 279 - -
Sto11g1018 282 CDD DnaJ_C 104 265 - -
Sto11g1018 282 SUPERFAMILY HSP40/DnaJ peptide-binding domain 106 183 IPR008971 GO:0006457|GO:0051082
Sto11g1018 282 Gene3D - 183 263 - -
Sto11g1018 282 Pfam DnaJ domain 5 71 IPR001623 -
Sto11g1018 282 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 279 - -
Sto11g1018 282 Gene3D - 102 181 - -
Sto11g1018 282 Gene3D DnaJ domain 1 97 IPR036869 -
Sto11g1018 282 PRINTS DnaJ domain signature 7 25 IPR001623 -
Sto11g1018 282 PRINTS DnaJ domain signature 25 40 IPR001623 -
Sto11g1018 282 PRINTS DnaJ domain signature 46 66 IPR001623 -
Sto11g1018 282 PRINTS DnaJ domain signature 66 85 IPR001623 -
Sto11g1018 282 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1018 Sto-Chr11 10474104 10475864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1018 6 81 C2H2 Transcription Factor Family AT1G74250 35.065 6.17e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1018 K09510 - gmx:100786068 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1018 11 10474104 10475864 Sto11g1018 11 10474104 10475864 ECH