Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1007 TTGAATGCTCAGGACAGGCTGCGCTCGATCCGCGCTAAGTTGGCAGTATTAGAAGGAAAGATGACACTGGCAATAATGGATGCCAACAAGATAGTTGAGGAGAAGCAGAAGAGGATTGATAATGCTCATAGAGCTTTAAGGTTTCTTAAGACTACTtgtgtggtttggcctaatgcAGCCTCAGAAGTACTTTTGGCGGGATCATTTGATGGTTGGTCCACGCAGAGAAAGATGGAGAAATCAAGTGCTGGTGTCTTTTCTGTACACCTACAGTTGTATCCTGGAAAATATGAGATCAAATTCATTGTTGATGGTGAATGGAAAATCGATCCGCTACGCCCTGTTGTTCATAATAATGGCTTCGAGAATAATGTGCTCATTATTCATGATTGA 393 0.3969 LNAQDRLRSIRAKLAVLEGKMTLAIMDANKIVEEKQKRIDNAHRALRFLKTTCVVWPNAASEVLLAGSFDGWSTQRKMEKSSAGVFSVHLQLYPGKYEIKFIVDGEWKIDPLRPVVHNNGFENNVLIIHD 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1007 130 SUPERFAMILY E set domains 51 129 IPR014756 -
Sto11g1007 130 PANTHER PROTEIN PTST HOMOLOG 2, CHLOROPLASTIC 2 129 - -
Sto11g1007 130 PANTHER PROTEIN PTST HOMOLOG 3, CHLOROPLASTIC 2 129 - -
Sto11g1007 130 Gene3D Immunoglobulins 48 130 IPR013783 -
Sto11g1007 130 Pfam Glycogen recognition site of AMP-activated protein kinase 52 129 IPR032640 -
Sto11g1007 130 CDD E_set_AMPKbeta_like_N 51 128 - -
Sto11g1007 130 Coils Coil 25 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1007 Sto-Chr11 10383014 10384373 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1007 60 130 Protein tyrosine phosphatase (PTP) family AT3G01510 31.507 1.31e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1007 - - gmx:100814629 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1007 11 10383014 10384373 Sto11g1007 11 10383014 10384373 ECH