Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1005 ATGAGTCGCAAGCGAGAGAAACCCTACTTTTCCCGCCACTCCTCATCACACTCCATGCCCAAGAGGCGCCCCGCCGCCGACGCCGACGATGCCAAGTTCACGACAAGGCCTGCGCCGCCTTCCGCTGTCGTCGTTATGGGTCTTCCTTTGGACTGCTCCGTTCTTGATCTCAAGTCCCGATTCGAGATCTACGGTCCAATCTCCCGCATCCGCATCGACCGTGACGCCGTTGGCTATATTACTTATCGGAGTAAGGAATCTGCCGATGCCGCCATAGCTGCCGCTGTTGACCCTTCTTTCGGAATCACTATCAATTCTAAAAGGGTGCAGGTATTGTGGGCAACCGATCCTCTAGCCATGTGGAGGGAAGGAATAGGTAATAACAAGGAGAAAGGGTCTATGTCAAAACTTTTGCGGCCTGAGGTGCCTTTGAGAAGACATGGGAGAGGTAATAAACTCGCTTCGGCTGTAGTGAATCCGAAAACTAGTGAGGGTAGCTCAGGTGTAGATGTGCCTTTCAAGGGCAGAGAAATCGTTGCTTATGATGATATCCTGTAA 558 0.5197 MSRKREKPYFSRHSSSHSMPKRRPAADADDAKFTTRPAPPSAVVVMGLPLDCSVLDLKSRFEIYGPISRIRIDRDAVGYITYRSKESADAAIAAAVDPSFGITINSKRVQVLWATDPLAMWREGIGNNKEKGSMSKLLRPEVPLRRHGRGNKLASAVVNPKTSEGSSGVDVPFKGREIVAYDDIL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1005 185 SMART rrm1_1 42 112 IPR000504 GO:0003723
Sto11g1005 185 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 41 116 IPR000504 GO:0003723
Sto11g1005 185 CDD RRM_SF 43 87 - -
Sto11g1005 185 Gene3D - 1 118 IPR012677 -
Sto11g1005 185 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 43 94 IPR000504 GO:0003723
Sto11g1005 185 SUPERFAMILY RNA-binding domain, RBD 14 125 IPR035979 GO:0003676
Sto11g1005 185 MobiDBLite consensus disorder prediction 1 34 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1005 1 185 Homeobox Transcription Factor Family AT1G27050 53.171 2.97e-64 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1005 - - ccaj:109806897 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1005 11 10376663 10377596 Sto11g1005 11 10376663 10377596 ECH