Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0985 ATGGGAAAGACTCCTGGAAAATGGATCAAGGCCTTGCTTACAGGGAGGAAATCGTCAAAAAAGAGAGATTCTTTTGTAAGTTCTTTCATTAAAACTTCAAGTAACAAGGATGTGCTGGTGTCTTCTGAGGCATATGTCGCTGCTTCAATTGTGGATTCTTCACTGATATCCCAGCCAACTTCTGGAGCTAATGCCACTAAAGAAGCACTTTCTGAAAAGGGCTTAGTAAGTGAATCATCAAATGACAAGGTTATTCTCTCAGCGAGAGAGGAAGAGACCAATGCACAAGCTGCTGTTAGTTTTGATTCACAGGATGATCTTGAGAAAATCAAGCTTAAGCAAGCCGCAATAAAAGCTCAGGCTGCTTTTAGAGGCTATCAGGCTCGTTGTGAATATCAACGACTCAAAGGTATCGTACAGCTGCAAGCTCTTATTCGTGGTCACTTGGTCAGAAGACAAGCAGTTTCTACTTTATACTGTGTGAAAGGAATAGTTAAGTTTCAAGCATTGGCTCGTGGTTACAAGGTTAGACATTCTGAGATTGGTCTTGCAGTCCGTAAAATTTGCAAGCTTCTGGCCTCATCAACCTCTGTATTGCCTCTACGTCTCAATTATGACCATGGAGAACCTAACGCAACTTGGGAATGGCTGGACCGTTGGACAAGGTCACAGTTTTGGGCCCTTCTGCCAGAATCAAAAACAACACTTGATTCAGGGTCTAATGAGAAAAATAGCAGTAATCAAACAGTTGAAAGTAATGAGGGCCAAGTTAAAAGAAAGACCCGGAAAGTTTCTGGTGCTAAGGCCGATGATGGTTCCATCTCCGATTCTAACAAACAAAAACAGCGTCCAAAGAAGGTTTCAACTCGCCCATTGCATTCAAGTCAGGAAAATTCACAGAAGGAAGTTGAGAaaagcaatttaaaaaaaactatcaagCATAATGTTCCTGATAGATCTGAGACTGCTAATGAGAAAAGAAAGCACATAGGGAGAAAAATATCCAGCCAGAGTGTCTCTGATGTTTCAGAGCAGAGCCCGAGTGTTTCTGCACAAAAAGTAAAAGATTTGTCTGTGTCAAAATCCAAACAGTCTGATGTTGAGCAAAGTCCAGGACAGCAAGCAGAAGATGAACATGGTAATGAGTTACATGCTAGTCCTACGGCTGACTTGCCAACTAGCTTGAACAATGCTAAAGATGAAAGAATTCAAGGAGTCAGTGATGACTTGAACTGTGGTAACAATTGTATCAGTAGTGTGAGCCCTAAGAACTACCAGAGAAGAGCTTCACTGCCTGCCAAATTTGACAATCAAGACGATGGAGTACAAAACACTCCGAGACTGCCCAGCTATATGGCCCCTACTGAATCTGCAAAAGCTAGGCTAAGAGGACAAGGCTCCCCAAGGCTTGCTAATGACTTGGTAGATAAAAATGGTATAACCAGGAGATTTTCACTTTCATCTTCAGTTAATGGCAAGTTAGGTTCATTTTCTCCGCGAGCAGAAAGACTGGTAGCCATGAGCAGCAAAGGAATAATTAGGAATGACAGATCCCTGTCATCTTCAAGGGATGGGACTGACAAGTTGATCCAACCTCAGTGGAGAAGGtga 1611 0.419 MGKTPGKWIKALLTGRKSSKKRDSFVSSFIKTSSNKDVLVSSEAYVAASIVDSSLISQPTSGANATKEALSEKGLVSESSNDKVILSAREEETNAQAAVSFDSQDDLEKIKLKQAAIKAQAAFRGYQARCEYQRLKGIVQLQALIRGHLVRRQAVSTLYCVKGIVKFQALARGYKVRHSEIGLAVRKICKLLASSTSVLPLRLNYDHGEPNATWEWLDRWTRSQFWALLPESKTTLDSGSNEKNSSNQTVESNEGQVKRKTRKVSGAKADDGSISDSNKQKQRPKKVSTRPLHSSQENSQKEVEKSNLKKTIKHNVPDRSETANEKRKHIGRKISSQSVSDVSEQSPSVSAQKVKDLSVSKSKQSDVEQSPGQQAEDEHGNELHASPTADLPTSLNNAKDERIQGVSDDLNCGNNCISSVSPKNYQRRASLPAKFDNQDDGVQNTPRLPSYMAPTESAKARLRGQGSPRLANDLVDKNGITRRFSLSSSVNGKLGSFSPRAERLVAMSSKGIIRNDRSLSSSRDGTDKLIQPQWRR 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0985 536 MobiDBLite consensus disorder prediction 235 395 - -
Sto11g0985 536 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Sto11g0985 536 MobiDBLite consensus disorder prediction 335 371 - -
Sto11g0985 536 MobiDBLite consensus disorder prediction 514 528 - -
Sto11g0985 536 MobiDBLite consensus disorder prediction 235 254 - -
Sto11g0985 536 Gene3D - 107 138 - -
Sto11g0985 536 MobiDBLite consensus disorder prediction 514 536 - -
Sto11g0985 536 MobiDBLite consensus disorder prediction 255 283 - -
Sto11g0985 536 PANTHER IQ-DOMAIN 5-RELATED 1 533 - -
Sto11g0985 536 Pfam IQ calmodulin-binding motif 114 133 IPR000048 GO:0005515
Sto11g0985 536 Pfam IQ calmodulin-binding motif 162 178 IPR000048 GO:0005515
Sto11g0985 536 Pfam IQ calmodulin-binding motif 136 153 IPR000048 GO:0005515
Sto11g0985 536 MobiDBLite consensus disorder prediction 297 334 - -
Sto11g0985 536 Pfam Protein of unknown function (DUF4005) 437 512 IPR025064 -
Sto11g0985 536 SMART iq_5 134 155 IPR000048 GO:0005515
Sto11g0985 536 SMART iq_5 159 181 IPR000048 GO:0005515
Sto11g0985 536 SMART iq_5 111 133 IPR000048 GO:0005515
Sto11g0985 536 ProSiteProfiles IQ motif profile. 134 163 IPR000048 GO:0005515
Sto11g0985 536 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0985 Sto-Chr11 10219694 10222833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0985 99 536 IQD Protein Family AT2G02790 37.475 5.61e-82 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0985 - - aprc:113869184 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0985 11 10219694 10222833 Sto11g0985 11 10219694 10222833 ECH
Sto11g0985 11 10219694 10222833 Sto3g1520 3 11226707 11234334 ECH
Sto11g0985 11 10219694 10222833 Sto12g0879 12 5502432 5506167 ECH