Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0982 ATGGGTAACTGCCTCGATTCTTCTGCCAAAGTAGATACAGCTCAAAGCTCCCGAGTCAATTCTGGGAGTTGGGGTTCTGATGGTCTGATGGATGCATCTGGAATTTCAAAAGCTAGTCCTTCATCTGCTCCTTCCAGCTTATCACTTCCATCATACAGTGAAAAAAGTAATGCCTCAAGTCTTCCCACACCAAGATCTGAGGGTGAAATCTTATCTTCTCCAAATCTAAAGGCCTTCGCATTCAATGAACTAAGGAATGCTACCAGAAATTTTCGTCCTGACAGTCTTCTTGGTGAAGGGGGATTTGGATATGTTTATAAGGGATGGATTGATGAACACACATTTACAGCTTCAAAACCTGGATCAGGAATGGTTGTTGCCGTGAAAAAGCTAAAACCTGAAGGTTTTCAAGGTCATAAGGAGTGGCTGaCTGAAGTTAATTACCTTGGGCAACTACACCATCCTAATCTAGTTAAATTAATTGGGTATTGCTTGGAGGGAGAGAACCGTCTATTGGTATATGAGTTTATGCCCAAAGGGAGCTTAGAGAACCATCTGTTTAGAAGAGGACCTCAGCCACTCTCTTGGTCAGTGAGGATGAAAGTGGCCGTTGGGGCTGCCAGGGGGCTCTCTTTTCTCCATAATGCCAAGTCGCAAGTCATATACCGTGATTTCAAAGCTTCTAATATCCTACTAGATGCTGAGTTCAATGCTAAACTCTCTGATTTTGGCTTAGCTAAGGCGGGTCCTACTGGTGATAGAACTCATGTGTCCACTCAAGTTATGGGTACTCATGGATATGCAGCACCTGAATATGTTGCTACAGGCCGGTTAACTGCCAAAAGTGATGTATATAGCTTTGGAGTTGTGCTGCTTGAACTTCTGTCTGGAAGAAGAGCTGTTGATAGATCAAAAGCTGGTGTAGAGCAGAATCTAGTAGACTGGGCCAAACCATATTTGGGTGACAAAAGAAAACTTTTTAGGATTATGGACACCAAGTTAGAGGGCCAATACCCCCAGAAAGTAGCCTTCACGGCAGCAAGTCTTGCTCTGCAATGCCTGAATAGTGAAGCCAAGGCAAGGCCTTCAATGACAGAGGTTTTAACAACCCTTGTGCAGATTGAAGCCCCCAAGAATGCAGGCCGACACTCCCACTCAGATCATCAGAGAGGCCACGCAACTGTAAGAAACTCCCCTGCACGTAACAGGTCTCCCCTGCATCTGACTCCTACTGCTTCCCCATTGCCATCTCATCGGCAAGCTGCTCGGTTTAGTTCTAGTTGTTCTAAGGCAGCCACCACTTCAGCCATTGTTGGGCGTTGCTTGGGGTTTGAGGAGAGACAGCTGACCCACCGAGCCGGAGTCCCCGAGTGTTTCCTCACTGCGGTAGAGCCCGACAATATCTCGAGCAAAACTACTCCAAAGCTTACCTGTGGCTACATACTCTGGAGCAAAATAGCCTCTGGTGCCAAGGATTCTTGTGGAAACATGGGAGTGGTCACCTTCAGATACCCTAAACCCCTTGCTGCCCCAACTGCTATATTAATTCTCCTGTTCCAGTTTAGCTTTCTTCTGTCTTCTTCTGTTCATGCCAAtacacaagaagaagaagaagataatacTATGCACAGTCATGCTTTATTCTTTATTTCTGCATTTTTGTCTGCTTACCTTGCAAGAGATGGTCCTCCAAGCTTCCTTCAACCATATACTCATAAACCAACATCCTATGCTCACCCTCACGGCAGTACCCTACGAGCCTCACCACGTTCGGATGGCTTATTTTGCTCAGATACACCACTTCATTCTGTAGACCAGCCATTCTTCATGGCCTCGAGCTCCTGGCCTTCTTATTCTCTTAACAGCTATGGGAAACCCTCCTCCATTTGGTTTTGCAGCATTCAAGGTGTATTGCGTGAGATGTCCCTTATAGACATCACCAAAACCTCCTTGCCCTATCAAGTTCTTATTGCTGAATCTGCGTGTGGCATTTTCCAACACTTGATAGCTAAAGCACTTGAGCCTACGAGTCTGGAAATCTATACCCTTATCCACCTTCAGAACATTCAAATCCCTTGGATTAGCTATGTATCTCCTTCctga 2103 0.4508 MGNCLDSSAKVDTAQSSRVNSGSWGSDGLMDASGISKASPSSAPSSLSLPSYSEKSNASSLPTPRSEGEILSSPNLKAFAFNELRNATRNFRPDSLLGEGGFGYVYKGWIDEHTFTASKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWSVRMKVAVGAARGLSFLHNAKSQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRSKAGVEQNLVDWAKPYLGDKRKLFRIMDTKLEGQYPQKVAFTAASLALQCLNSEAKARPSMTEVLTTLVQIEAPKNAGRHSHSDHQRGHATVRNSPARNRSPLHLTPTASPLPSHRQAARFSSSCSKAATTSAIVGRCLGFEERQLTHRAGVPECFLTAVEPDNISSKTTPKLTCGYILWSKIASGAKDSCGNMGVVTFRYPKPLAAPTAILILLFQFSFLLSSSVHANTQEEEEDNTMHSHALFFISAFLSAYLARDGPPSFLQPYTHKPTSYAHPHGSTLRASPRSDGLFCSDTPLHSVDQPFFMASSSWPSYSLNSYGKPSSIWFCSIQGVLREMSLIDITKTSLPYQVLIAESACGIFQHLIAKALEPTSLEIYTLIHLQNIQIPWISYVSPS 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0982 700 SUPERFAMILY Protein kinase-like (PK-like) 63 370 IPR011009 -
Sto11g0982 700 PANTHER OS01G0588500 PROTEIN-RELATED 29 419 - -
Sto11g0982 700 MobiDBLite consensus disorder prediction 1 27 - -
Sto11g0982 700 MobiDBLite consensus disorder prediction 395 419 - -
Sto11g0982 700 ProSitePatterns Protein kinases ATP-binding region signature. 97 130 IPR017441 GO:0005524
Sto11g0982 700 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 29 419 - -
Sto11g0982 700 Pfam Protein tyrosine and serine/threonine kinase 95 371 IPR001245 GO:0004672|GO:0006468
Sto11g0982 700 Gene3D Phosphorylase Kinase; domain 1 67 176 - -
Sto11g0982 700 ProSiteProfiles Protein kinase domain profile. 91 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0982 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Sto11g0982 700 MobiDBLite consensus disorder prediction 1 69 - -
Sto11g0982 700 MobiDBLite consensus disorder prediction 35 69 - -
Sto11g0982 700 Gene3D Transferase(Phosphotransferase) domain 1 177 398 - -
Sto11g0982 700 MobiDBLite consensus disorder prediction 379 419 - -
Sto11g0982 700 CDD STKc_IRAK 97 374 - -
Sto11g0982 700 MobiDBLite consensus disorder prediction 380 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0982 Sto-Chr11 10189484 10194287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0982 66 371 Glycoside Hydrolase AT3G07070 53.074 2.60e-109 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto11g0982 PK_Tyr_Ser-Thr 6.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0982 - - gmx:100809778 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0982 11 10189484 10194287 Sto11g0982 11 10189484 10194287 ECH