Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0980 TTGGGTTATGTGAGTTTCATTCAGGAAGATGATATACTCAGAAAGCAGATTAGCATCCATGGAACTGAAAATTGGGCAATtattgcttctaaattcaatgACAAAACGACAAGACAGTGCAGAAGGAGATGGTACACTTACTTGAATTCTGATTTCAAGAAAGGAGGATGGTCTCCAGAGGAAGACTTGCTCTTATGTGAGGCTCAGAAAATATTTGGTAACAGATGGACAGAAATAGCCAAGGTGGTTTCAGGCagAACCGATAATGCTGTGAAAAACCGTTTCTCCACACTGTGCAAGAAGAGAGCGAAATTTGAAGCCTTAGCAAAAGAGAACAACACTTCTTGCACCAATTCAAATAACAAAAGGATTATTTTCCAACATGGTGATAATTCAGACTCAACATCTGAGGCTGCACCTCCTGCTAAGAAGATAAGGAGAGCCCATATCCCTGATGCTGCAGAAAAGATCAACTATGGAGACAGATCCCATAAGCAATGTGGAAAACCAATAAATCAGCAGCCAAGAGCGCCATTTTCGATATTAGCGCACAACTCGCCAGACCAGCTTGAAGCCTCCAATGCCAAGATCAGCAGAACTGACCAGAATTGCAAAACCCAAGTAACATTTCTTGAAGAGGATGATCCAAAATTTAGTGTATTGATGCAACAAGCAGAGTTACTAAGTTCGCTAGCTCTAGAAGTTCATACTGATGATGTGGACCAGAGTCTTGAAGATGCATGGAAGGTGCTCCAAGAATATTTGAACCGATCCAAAGAATCAGATATTATCTATAAGATTCCAGATTTACAGCTCGTAGATCTTAAAGATATGATGGAGTACTTAAAGAGTAGTAATGAGGGAAGCCAGCCATGTTGGAGGCAACCAGAACTATACGAAGACTCTCCAAGCAGTTCTGAATACAGTACAGGATCAACTGTGCTGCCTCATTCAGTAAGTGATAATTTGGAACACTCTCTGCTTCAGGATATTGGAACCGAACTGAAGCCTATCCAACTCGGAGATCAAAAAGGAGTTAGTGAATGTGGGAAAGAGGTTCTTTCTGCTGCAACTGTGGGTCAAGATATCTTCCCCTCTTGTGAGGAACAGATAAGCAATGATGGCATTATTTCTGCCTCATCAAGCACAGAGTTCAGTTCCCCTCTTCAAGTCACCCCTTTGTTCAGATCCTTGGTTGCAGGAATTCCCAGCCCACAATTTTCAGAAAGTGAAAGGAACTTCCTAATGAAAACACTTGGAATAGAGTCCCCATCCATGAACCCTAGTGCCAACACCTCACAGCCACCACCTTGCAAAAGAGCCCTACTACACAGTCTATAA 1341 0.4161 LGYVSFIQEDDILRKQISIHGTENWAIIASKFNDKTTRQCRRRWYTYLNSDFKKGGWSPEEDLLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKFEALAKENNTSCTNSNNKRIIFQHGDNSDSTSEAAPPAKKIRRAHIPDAAEKINYGDRSHKQCGKPINQQPRAPFSILAHNSPDQLEASNAKISRTDQNCKTQVTFLEEDDPKFSVLMQQAELLSSLALEVHTDDVDQSLEDAWKVLQEYLNRSKESDIIYKIPDLQLVDLKDMMEYLKSSNEGSQPCWRQPELYEDSPSSSEYSTGSTVLPHSVSDNLEHSLLQDIGTELKPIQLGDQKGVSECGKEVLSAATVGQDIFPSCEEQISNDGIISASSSTEFSSPLQVTPLFRSLVAGIPSPQFSESERNFLMKTLGIESPSMNPSANTSQPPPCKRALLHSL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0980 446 MobiDBLite consensus disorder prediction 422 438 - -
Sto11g0980 446 Gene3D - 56 127 - -
Sto11g0980 446 SUPERFAMILY Homeodomain-like 27 107 IPR009057 -
Sto11g0980 446 SMART sant 8 50 IPR001005 -
Sto11g0980 446 SMART sant 53 101 IPR001005 -
Sto11g0980 446 CDD SANT 8 48 IPR001005 -
Sto11g0980 446 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 103 IPR017930 -
Sto11g0980 446 MobiDBLite consensus disorder prediction 299 314 - -
Sto11g0980 446 CDD SANT 57 98 IPR001005 -
Sto11g0980 446 MobiDBLite consensus disorder prediction 422 446 - -
Sto11g0980 446 MobiDBLite consensus disorder prediction 286 314 - -
Sto11g0980 446 Gene3D - 7 53 - -
Sto11g0980 446 ProSiteProfiles Myb-like domain profile. 49 99 IPR001005 -
Sto11g0980 446 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 48 IPR017930 -
Sto11g0980 446 Pfam Myb-like DNA-binding domain 54 97 IPR001005 -
Sto11g0980 446 Pfam Myb-like DNA-binding domain 8 48 IPR001005 -
Sto11g0980 446 PANTHER TRANSCRIPTION FACTOR MYB88 8 443 - -
Sto11g0980 446 ProSiteProfiles Myb-like domain profile. 8 48 IPR001005 -
Sto11g0980 446 PANTHER MYB PROTEIN-RELATED 8 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0980 Sto-Chr11 10172651 10176814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0980 43 446 MYB Transcription Factor Family AT1G14350 52.913 2.63e-134 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto11g0980 Myb_DNA-binding 6.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0980 K09422 - gmx:100807667 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0980 11 10172651 10176814 Sto11g0980 11 10172651 10176814 ECH