Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0978 ATGGTTGATGGGAAAGGGCTTCTGGGCTTTGGTCCTAATGCACGATGCTTGTTGGTCAATACAAGCAATGAAATGGCTTTCTTTCCAGCAAATTTCATGTTGCAAAACCCTCACCAAgaagatcatcatcatcaacctcTACCTTCTCTCAACTCAATTCTCCCTCAAGATTTTCATGGGGGAGCATCGTTTCTAGGGAAGAGATCTATGACATTTTCAGGGATTGAGCTTGGTGGTGAAGAAGCAAATAATGGTGATGAAGACTTGTCTGATGATGGATCTCAGGCAGGGGAGAAGAAGAGGAGGCTTAACATGGAACAAGTGAAGACACTTGAGAAAAGCTTTGAGCTTGGAAACAAGCTGGAACCTGAGAGAAAAATGCAGCTTGCTAGGGCTCTTGGGTTGCAGCCTAGGCAGATTGCTATATGGTTCCAGAACAGGAGGGCCAGGTGGAAGACTAAGCAGTTGGAGAAGGACTATGATCTCCTCAAAAGACAGTATGAAGCTATCAAAGCAGATAATGATTCCCTTCATGCTCAAAACCAAAAACTTCAGGCAGAGCTAATTTTGTTGCTgaaactgatatatatatatatatatatatatatatatatatatatatatatgcagatatTGGCACTGAAAAGCAGAGAAGTACCAACAGAATCAATCAACCTGAACAAGGAAACAGAGGGATCTTGCAGCAACAGAAGTGAGAATAGCTCAGACATTAAGTTGGATATCTCAAGAACACCTGCTATAGATAGTCCTTTAACAAGCAGACCCTTCTTCCCATCATCATCTTCTGCTAGGCCTTCTTCAGGAGGAGTGGCTCAGCTTTTCCAAACATCTTCAAGACCAGACCACCTTCAATGCCAGAAGATTGATCAGATGGTGAAAGACGAGAGCTTGAGCAACATGTTCTGTGGGATTGATGATCAAACAGGCTTCTGGCCTTGGTTGGAGCAGCAACATTTCAattga 984 0.4045 MVDGKGLLGFGPNARCLLVNTSNEMAFFPANFMLQNPHQEDHHHQPLPSLNSILPQDFHGGASFLGKRSMTFSGIELGGEEANNGDEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYEAIKADNDSLHAQNQKLQAELILLLKLIYIYIYIYIYIYIYMQILALKSREVPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPLTSRPFFPSSSSARPSSGGVAQLFQTSSRPDHLQCQKIDQMVKDESLSNMFCGIDDQTGFWPWLEQQHFN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0978 327 MobiDBLite consensus disorder prediction 77 101 - -
Sto11g0978 327 PRINTS Lambda-repressor HTH signature 125 134 IPR000047 GO:0003677
Sto11g0978 327 PRINTS Lambda-repressor HTH signature 134 150 IPR000047 GO:0003677
Sto11g0978 327 Gene3D - 91 160 - -
Sto11g0978 327 SUPERFAMILY Homeodomain-like 90 156 IPR009057 -
Sto11g0978 327 Pfam Homeobox associated leucine zipper 154 191 IPR003106 GO:0006355|GO:0043565
Sto11g0978 327 CDD homeodomain 99 155 IPR001356 GO:0003677
Sto11g0978 327 ProSitePatterns 'Homeobox' domain signature. 129 152 IPR017970 GO:0000981|GO:0006355
Sto11g0978 327 ProSiteProfiles 'Homeobox' domain profile. 94 154 IPR001356 GO:0003677
Sto11g0978 327 SMART HOX_1 97 158 IPR001356 GO:0003677
Sto11g0978 327 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 23 327 - -
Sto11g0978 327 Coils Coil 146 187 - -
Sto11g0978 327 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 23 327 IPR045224 GO:0003700
Sto11g0978 327 Pfam Homeodomain 99 152 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0978 Sto-Chr11 10148238 10150880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0978 19 327 Homeobox Transcription Factor Family AT1G69780 57.492 6.17e-112 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sto11g0978 Homeodomain 1.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0978 K09338 - gmx:100808033 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0978 11 10148238 10150880 Sto11g0978 11 10148238 10150880 ECH