Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0970 ATGATACGATTTAGGACCTATCCACCGCCTCCTGCAGCCCGGCCCAATGACCCGACCCGATCCACTACCAAGGTGCCTCCGAAGCGGGCCTCCACCAAGGACCGGCACACGAAGGTGGACGGGCGGGGCCGCCGGATCCGCATGCCGGCCGCCTGTGCTGCCAGGGTGTTCCAGCTCACCCGGGAACTGGGGCACAAGTCGGACGGCGAGACCATCGAGTGGCTGCTCCAGCAGGCAGAGCCGGCGGTGATCGCGGCCACGGGGACGGGCACCATCCCGGCCAATTTCACGTCGCTCAACATCTCGCTGCGGAGCTCCGGGTCCACGGTGTCGGCGCCCTCGCACTACTTCAGGGGCAGTTATGGTAATTACTTCAGCCCCAGCTTGTTGTCTCCCGCCACCACTCTCATGGATGATTCTAGAAGGATCTTGTTCTCCTCcgacaataacaataataataacaactcCTCCATCATTAGTTTCAACCCTTCTAACAATAATAATGTCAATGCCATACTACAACAAGCCAAGCAAGAGCAAGAAAGCCGCCTGGAattgacgacgacgacgacgacggagTCGGACGAGAGCTTGGGAAGAAAGAGAAGGGCGGCGGCCGGGGAGGAGGCGGTGTCGCAAAGTCAGATGGGGGGTTATAACTTGTTGCAATCGAGCACGGGGTCGATTCCGGCGAGTAATTCCTTTTGGATGGTAAGTAGCCCCGCCGGGAGTAGTAGTGGCGATCCCATATGGGCAATTCCGTCCAATAATTATGGTAACATGTATAGAGGAGGTGGGATGTTCATGAATTTTGGTTCTCCAATGCCTCTAATGGGTCAACAATTGGGTATGAATGAGACCAATTTAGGGATGCTTGCTGCCTTAAATGCCTATAGACAGATTCCGGTCACCGGAGGAGGCGTCTCGGAGGCTCCGGCGATCACCGGCAATGGCGGAGACCAACATTAG 969 0.5397 MIRFRTYPPPPAARPNDPTRSTTKVPPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVSAPSHYFRGSYGNYFSPSLLSPATTLMDDSRRILFSSDNNNNNNNSSIISFNPSNNNNVNAILQQAKQEQESRLELTTTTTTESDESLGRKRRAAAGEEAVSQSQMGGYNLLQSSTGSIPASNSFWMVSSPAGSSSGDPIWAIPSNNYGNMYRGGGMFMNFGSPMPLMGQQLGMNETNLGMLAALNAYRQIPVTGGGVSEAPAITGNGGDQH 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0970 322 MobiDBLite consensus disorder prediction 1 40 - -
Sto11g0970 322 MobiDBLite consensus disorder prediction 177 212 - -
Sto11g0970 322 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 312 IPR005333 GO:0003700
Sto11g0970 322 MobiDBLite consensus disorder prediction 177 194 - -
Sto11g0970 322 Pfam TCP family transcription factor 31 211 IPR017887 -
Sto11g0970 322 ProSiteProfiles TCP domain profile. 32 86 IPR017887 -
Sto11g0970 322 PANTHER TRANSCRIPTION FACTOR TCP23 19 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0970 Sto-Chr11 10059096 10063037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0970 24 281 TCP Transcription Factor Family AT3G47620 43.949 1.76e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto11g0970 TCP 3.3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0970 - - gmx:100781296 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0970 11 10059096 10063037 Sto11g0970 11 10059096 10063037 ECH