Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0948 ATGCCCTCCACCGCCTCCGACCCCCGGGATCCCCGCTCCCTGAAATGCGCCGCGTGTGGCTGCCACCGCAACTTCCACCGCCGTGACCCTCACGAGTTAATTCACTCCAACCCCAACTTCCTCAGCTGCTTCTACCCACCACCGCCTCCACTACCTCTACCTCACCGCGAGTTAAGCCCCAGCAGCACCAGCCAgagcccaagcccaagccccAGCAGCACCAGCCCAAGCCCATTGTCAAGCCCATCTCCACCGCCGGTCTCGCATTTCCCACCTTCCTACCACCACCACGCCGCATCGGCACCCCACATGCTGTTAGCACTCGGCAACGCCTATTCTGGACCGTCCGATGACCACCATCACCACCCCAATCAACATCGGGGCTTCATCAATTCCTCGGCGATGAAGATGGAGAGAGAGAACCACCACCCGAACGGGAAGAAGAGATTCAGAACCAAATTCAGCCAAGAGCAGAAGGAGAAGATGTATTCCTTCTCCGAGAAATTGGGTTGGAGAATGCAAAAAGGGGACGATAGAACGATCCAGGATTTCTGCAATGATGTCGGGGTTTCTAGAGGAGTCTTCAAGATGGTGTTGGAGATAATGCCATTGATGGGTTTGGTGAGCATTGCATGA 636 0.5425 MPSTASDPRDPRSLKCAACGCHRNFHRRDPHELIHSNPNFLSCFYPPPPPLPLPHRELSPSSTSQSPSPSPSSTSPSPLSSPSPPPVSHFPPSYHHHAASAPHMLLALGNAYSGPSDDHHHHPNQHRGFINSSAMKMERENHHPNGKKRFRTKFSQEQKEKMYSFSEKLGWRMQKGDDRTIQDFCNDVGVSRGVFKMVLEIMPLMGLVSIA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0948 211 MobiDBLite consensus disorder prediction 51 96 - -
Sto11g0948 211 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 1 29 IPR006456 -
Sto11g0948 211 MobiDBLite consensus disorder prediction 71 91 - -
Sto11g0948 211 Pfam ZF-HD protein dimerisation region 7 30 IPR006456 -
Sto11g0948 211 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 147 197 IPR006455 -
Sto11g0948 211 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 11-LIKE 1 198 - -
Sto11g0948 211 Gene3D - 131 200 - -
Sto11g0948 211 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 198 - -
Sto11g0948 211 SUPERFAMILY Homeodomain-like 139 196 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0948 Sto-Chr11 9928895 9930183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0948 1 199 ZF-HD Transcription Factor Family AT1G69600 40.796 5.61e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Sto11g0948 ZF-HD_dimer 5.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0948 - - gmx:100814924 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0948 11 9928895 9930183 Sto11g0948 11 9928895 9930183 ECH