Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0943 ATGGAGACTCAATTCCAACTCCAAGATCAACATAATTCAGGGCAACACAGTGTTGGGATACTTTCAATGCCCTATGCAGTTTCTCAAGCTGGTTGGATAAGTCTAATTCTTCTACTTTTTGTTGCAATTCTATGTTGGTACACAGGATTACTCCTCCAAAAGTGTATAGAAAAACACCCACTAATCAAAACCTACCCTGACATAGGTGAAGTAGCTTTTGGGTACAAAGGAAGAGCCATAGTATCCCTTTTCATGTACTTAGAACTCTACTTAGTGGCCACAGAGTTCCTGATATTAGAAGGAGACAATCTGGAGAAGTTGTTTCCAGAAATGAAGTTCAGAATTGGTGGGCTTAGAATTGGAACCAAACAAGGCTTTGTTCTTATAACTGCTTTGGTAATATTACCAACCACTTGGCTGAGAAGCTTGAAAGCTCTGGCTTATGTTTCTGTGGGTGGGGTAGTTGCTTCAGTTATTTTGGTTGGTTGTGTTGTGTGGGTGGGTGTGATGGATGGTGTGGGGTTTCATGAAAGAGGTGAGTTTGTGAGTGATTGGGGGAATTTGGCTACTTCTATTAGCCTCTTTGTTTTCTGTTTTAATGGTCATGCTCTTTTGCCCACTCTTTGCACTTCCATGAGAGATCAAACTCAGTTTCCTAAGGTCTTACTTTTCTGCTTTATCACAAGCACCATAACCTATGGATCCATGGCCATCACAGGCTACTTAATGTATGGAGAATACATAAAGTCACAAGTGACCTTAAACCTTCCAACACACAAAATAAGCACAAGCATAGCAATATACACCACATTGATCAACCCCTTCACAAAATATGCATTCATGGTGACTCCAATTGCCACTGCCATAGAGGACACATTGCATTTCCAGAAGAGCAGGATTTTTGGCATTATAATTAGGACATTTATTGTTGTTAGTACTGTGATTGTCGCTCTGTTCATTCCCTTCTTTGGATACCTTATGGGATTTATTGGTGCATTCTTGAGTGTCACTGTCTCACTCTTATTGCCTTGCTTGTGTTACCTCAAGATTCACAGAAATATTGCACAGCAGCTAGGGTTTGAATTGGGGGTTATAATTGGGATTCTAATTGTAGGATCATTCATTGGTGTGCAAGGTACCTATAGTTCTCTGAGAGAGATAGTGAATCACCTCCAAAAGTCATAA 1185 0.4025 METQFQLQDQHNSGQHSVGILSMPYAVSQAGWISLILLLFVAILCWYTGLLLQKCIEKHPLIKTYPDIGEVAFGYKGRAIVSLFMYLELYLVATEFLILEGDNLEKLFPEMKFRIGGLRIGTKQGFVLITALVILPTTWLRSLKALAYVSVGGVVASVILVGCVVWVGVMDGVGFHERGEFVSDWGNLATSISLFVFCFNGHALLPTLCTSMRDQTQFPKVLLFCFITSTITYGSMAITGYLMYGEYIKSQVTLNLPTHKISTSIAIYTTLINPFTKYAFMVTPIATAIEDTLHFQKSRIFGIIIRTFIVVSTVIVALFIPFFGYLMGFIGAFLSVTVSLLLPCLCYLKIHRNIAQQLGFELGVIIGILIVGSFIGVQGTYSSLREIVNHLQKS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0943 394 PANTHER OS05G0424000 PROTEIN-RELATED 15 389 - -
Sto11g0943 394 Pfam Transmembrane amino acid transporter protein 18 356 IPR013057 -
Sto11g0943 394 PANTHER OS06G0228500 PROTEIN 15 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0943 Sto-Chr11 9888329 9890592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0943 1 388 Amino Acid or Auxin Permease AAAP Family AT3G28960 48.515 5.78e-132 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0943 K15015 - pvy:116132859 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0943 11 9888329 9890592 Sto11g0943 11 9888329 9890592 ECH