Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0924 ATGGTTAGATCAGCATGCTGCCAAAAGGAGGGCTTGAAGAAAGGCCCATGGACTCCCAACGAAGACCAAATGCTCATCTCTTACATTCAACAACATGGCCATGAAAACTGGCGAACCTTACCTCCCAAAGCTGgtCTACAAAGATGTGGGAAAAGTTGCAGACTAAGATGGATCAATTACCTGAAACCAGATATCAAAAGAGGCAATTTCAGTTTACAAGAAGAAGGAACCATTATTCAGCTCCATGCTCTTGTTGGCAATAAGTGGTCAAAAATAGCATATCATTTGCCAAAGAGAACAGACAATGAGATAAAGAACTATTGGCACTCTCACATCAAGAAGAGGCTGATGAAGATGGGGATTGACCCAACCACGCACAAGCCCATGAGCCTACCCCACTCGAACCGTGACACACCCTATGTTCTTCACATGGCTCAGTGGGAGAGTGCTCGCCTCCAAGCCGAAGCCACATTCTCACGCGCTCCTCCGCCGCCTACTTCTTCACTGATTCCATTTCCACCATGCCTTGACATTCTCAAGGCATGCCAACTACTAACCGCATCATCATCATACTCCATCATACTACCCAATCATCATAACAATAACTCGAATCCTATGATGCTGGGTACTGTGGAACAACCACCattcacatcatcatcatcagtagTAGTACAACATCATAATAGcgagaataataataatgtgatgGAAATAGAAGAAGGTGTTGTTCCTGATCATGGTGATGCCAATTAtcttaatgatgatgatgatgatgcctACTCCAACAAATTAGATCATAACAATATTTTGGATTACTGGAATTGGTCATCATCATCAGTATCACTACTGGAGTTGGAGAATGCTGCTGCGCCATCATCGCCTTTCTTCTCATGCTGA 897 0.408 MVRSACCQKEGLKKGPWTPNEDQMLISYIQQHGHENWRTLPPKAGLQRCGKSCRLRWINYLKPDIKRGNFSLQEEGTIIQLHALVGNKWSKIAYHLPKRTDNEIKNYWHSHIKKRLMKMGIDPTTHKPMSLPHSNRDTPYVLHMAQWESARLQAEATFSRAPPPPTSSLIPFPPCLDILKACQLLTASSSYSIILPNHHNNNSNPMMLGTVEQPPFTSSSSVVVQHHNSENNNNVMEIEEGVVPDHGDANYLNDDDDDAYSNKLDHNNILDYWNWSSSSVSLLELENAAAPSSPFFSC 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0924 298 CDD SANT 69 112 IPR001005 -
Sto11g0924 298 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Sto11g0924 298 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sto11g0924 298 CDD SANT 16 61 IPR001005 -
Sto11g0924 298 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sto11g0924 298 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sto11g0924 298 SMART sant 66 114 IPR001005 -
Sto11g0924 298 SMART sant 13 63 IPR001005 -
Sto11g0924 298 Gene3D - 13 66 - -
Sto11g0924 298 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Sto11g0924 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Sto11g0924 298 Gene3D - 69 138 - -
Sto11g0924 298 PANTHER TRANSCRIPTION FACTOR MYB106 1 203 - -
Sto11g0924 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Sto11g0924 298 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0924 Sto-Chr11 9735984 9737055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0924 1 160 MYB Transcription Factor Family AT3G01140 68.485 2.37e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto11g0924 Myb_DNA-binding 3.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0924 K09422 - gmx:100792994 265.774