Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0922 TTGAAGAAAGGGCCATGGACTCCTGAAGAAGACCAGAAGCTCATCTCTTTCATTCAACAATATGGCCATGGAAGCTGGCgGCTTCGAAGATGTGGGAAAAGTTGTAGGCTGAGGTGGACAAACTACCTCAGACCAGACATCAAACGAGGAAAGTTCAGCTTGCAGGAGGAGCAAACTATTATTCAACTTCATGCTCTTCTTGGAAACAGATTGGGCATAGACCCCACCACACACAAGCCCAAAATTGACGCCGTCAACGTCAACTCCCCCCACGCCGCCAACCTCAGCCACATGGCTCAGTGGGAGAGCGCTCGGCTCGAAGCCGAAGCCAGGCTAGCCAAAGAATCCAAGCTCCTCCTCGGCTCCACCCAAGCCCAGCCACTACCCTTGACTCGACTTGTGCTCAAAAAAGTCACACCTCAGCCGTCGCCACCACAGTGCCTGGACGTACTGAAGGCATGGCAAAACTCATGGTCCAGCTCATCGAAGCCGGCTAAAATGCATAGCATGTACGCCATGATGTTAGCCACTGATGACCTTGAGTCCCCAACGTCCACCTTGAGCTTTCCTAACTCATCAAATTGTAACACTATTATTGCCAACCAAGTCTCACTTCCTAACTCTACTATCACTGCCACTTCTGGTGGtgctaatgatgatgatgacattgAGCCGTGGgagaatattaatattattgcgACGGCGGAAGCCTTGAGATCacaaggaggaagaagaggaggcTATGATGATAATGATCAATACTCAGAAGAGGAGAAGCATTATTGGAATACTATACTCAACTGGGCCTATGATTTGCCTTCACCTGCCCTCCCTTGA 837 0.4636 LKKGPWTPEEDQKLISFIQQYGHGSWRLRRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRLGIDPTTHKPKIDAVNVNSPHAANLSHMAQWESARLEAEARLAKESKLLLGSTQAQPLPLTRLVLKKVTPQPSPPQCLDVLKAWQNSWSSSSKPAKMHSMYAMMLATDDLESPTSTLSFPNSSNCNTIIANQVSLPNSTITATSGGANDDDDIEPWENINIIATAEALRSQGGRRGGYDDNDQYSEEEKHYWNTILNWAYDLPSPALP 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0922 278 SMART sant 2 45 IPR001005 -
Sto11g0922 278 Gene3D - 2 48 - -
Sto11g0922 278 Pfam Myb-like DNA-binding domain 6 59 - -
Sto11g0922 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 70 - -
Sto11g0922 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 70 201 - -
Sto11g0922 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 47 IPR017930 -
Sto11g0922 278 SUPERFAMILY Homeodomain-like 4 70 IPR009057 -
Sto11g0922 278 ProSiteProfiles Myb-like domain profile. 1 43 IPR001005 -
Sto11g0922 278 CDD SANT 5 43 IPR001005 -
Sto11g0922 278 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 70 201 - -
Sto11g0922 278 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0922 Sto-Chr11 9723877 9726598 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0922 1 189 MYB Transcription Factor Family AT3G01140 48.908 5.69e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto11g0922 Myb_DNA-bind_6 1.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0922 K09422 - gmx:100799222 246.514