Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0921 TTGAAGAAAGGGCCATGGACTCCTGAAGAAGACCAGAAGCTCATCTCTTTCATTCAACAATATGGCCATGGAAGCTGGCgGCTTCGAAGATGTGGGAAAAGTTGTAGGCTGAGGTGGACAAACTACCTCAGACCAGACATCAAACGAGGAAAGTTCAGCTTGCAGGAGGAGCAAACTATTATTCAACTTCATGCTCTTCTTGGAAAcagATGGTCAGCTATAGCAGCACATTTACCAAAGAGGACAGACAACGAGATAAAAAATTACTGGAATACCCATCTCAAGAAGAGGCTCACCAGATTGGGAATAGACCCCACTACTCACAAGCCCAAAAACGACGCCGTCAATGGCAACTCCCCCCACGCCGCCAACCTCAGCCACATGGCTCAGTGGGAGAGCGCTCGCCTTGAAGCCGAAGCCAGACTAGCCAAGGAATCCAAGCTCCAGCCCGGCTTCACCCAAGCCCAGCCACTTCCTCTGATGACTCGGCTTGTGCTCAACAAAATCACGCCTCAGCCGTCGCTACCGCCGTGCTTGGACGTACTGAAGGCGTGGCAAAATTCATGGTCAAGCTCAAGCTCAAGCTCATCCAAGCCGGCTAAGATGCACAGCATGTACGCCATGATGCTAGCCACGGACGATCTTGAGTCTCCAACCTCAACCTTGAGCTTCCCTAACTCATCAAACTCTAACACTATTAGTATTAGCCAAGTCCCACTTCCAAACTCTACCATCACCGCCACCGCCGCCGCTTCTGGTAGTGGCGCTGATGATGACATCGAGCCGTATATTATGGCGGCAGCCGAAGCGCTGAGATCAGGAGGAAGatcatatgatgatgatgacaagTTTGAGGGCTTGATTGAGAATTCGGAAGAAGAGGAGAAGCATTATTGGAATACTCTACTCAATTGGGCTAATGATTTGCCTTCGCCTGGCCTCCCTTAA 948 0.4926 LKKGPWTPEEDQKLISFIQQYGHGSWRLRRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLTRLGIDPTTHKPKNDAVNGNSPHAANLSHMAQWESARLEAEARLAKESKLQPGFTQAQPLPLMTRLVLNKITPQPSLPPCLDVLKAWQNSWSSSSSSSSKPAKMHSMYAMMLATDDLESPTSTLSFPNSSNSNTISISQVPLPNSTITATAAASGSGADDDIEPYIMAAAEALRSGGRSYDDDDKFEGLIENSEEEEKHYWNTLLNWANDLPSPGLP 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0921 315 SMART sant 2 45 IPR001005 -
Sto11g0921 315 SMART sant 48 96 IPR001005 -
Sto11g0921 315 SUPERFAMILY Homeodomain-like 2 90 IPR009057 -
Sto11g0921 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 98 IPR017930 -
Sto11g0921 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 43 IPR017930 -
Sto11g0921 315 Pfam Myb-like DNA-binding domain 49 94 IPR001005 -
Sto11g0921 315 Pfam Myb-like DNA-binding domain 3 43 IPR001005 -
Sto11g0921 315 Gene3D - 51 98 - -
Sto11g0921 315 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 245 - -
Sto11g0921 315 Gene3D - 2 48 - -
Sto11g0921 315 MobiDBLite consensus disorder prediction 103 122 - -
Sto11g0921 315 ProSiteProfiles Myb-like domain profile. 1 94 IPR001005 -
Sto11g0921 315 CDD SANT 51 94 IPR001005 -
Sto11g0921 315 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 245 - -
Sto11g0921 315 CDD SANT 5 43 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0921 Sto-Chr11 9714552 9715988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0921 1 148 MYB Transcription Factor Family AT3G01140 78.481 1.24e-86 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto11g0921 Myb_DNA-binding 2.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0921 K09422 - gmx:100799222 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0921 11 9714552 9715988 Sto11g0921 11 9714552 9715988 ECH