Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0908 ATGGAAGAGACAGAAGAGTCCAGTGGTAACATGAAATTCACAAGCCAGAGAAGGAGTTTGAGGGAGGAAGCAAACTCTCATGAGCATTTACACCATCACTATCCAGCTCTTCTTCCTCTACCTTCTCCTATACCTCTGAAACAACTAGCTTTCACACCACCTTTCCCTCAAAACCATAccatcaaatccaaaacccatttGCAAAATCATCCATGCAAGCTCAATAAAAATTCTTCATCAGATGACAAGGTCTCAGAAGCCACAATTGCTCCTGTATCACATACAAATTCAGCTCAGATAGGGCTTCATCTGCAAACCAAGGCTAAGGCATCACTCAAAGGAGATGATGGTGATGGGAAGAAACTTATATCTGCAAGGAGGCCAGATTCTGGTGGAAAAGAAGGTTCTGTTATCTCTCTGCTTGCCAACCACTTTCTGGTGAAATTTGATTCATCACAAAGAATATACCATTATAGTGTTGAAATCACTCCTAATCCCTCCAAGGAAATTTCCAGAGAAATCAAACAGAAACTGGTTGATAACAATTCAGCATGTTTCTCTGGTGCTTTTCCAGCATATGATGGGAGGAAGAATCTTTACAGCCCAATTAAGCTCCAGAATGATAAGCTTGAGTTCTACATAAGCCTCCCAATCCCCACCAGAAAAATGACATTACCTTATGAAGAAACACATGACTTGAAAGAGAAGAATGAACAGCTTAAACTGTTCAGGATAAACATCAAATTAGTTTCCAATATCAATGGGAAGGATTTGAGTAACTACTTGAGCAAAGATGGGGATGACTGGGTCCCACTTCCACAGGACTACCTTCATGCTTTGGATGTAGTCTTGAGGGAGAACCCATCTGAGAAATGTGTACCTATAGGAAGGTCATTTTATTCAAGTTCTATGGGAAAAACCAGAGAGATTGGAGGTGGAGCTGTTGGATTCAGAGGGTTCTTTCAGAGTCTTAGACCAACCCAGCAAGGTCTCTCTCTCAATGTGGATTTCTCAGTGACTGCTTTCCATGAGAGCATAGGAGTGATTCCGTACTTGCAGAAGCGTTTTGAGTTTCTTCGAGATCTTTCTCAAAGAAAGACAACTAGTTTAACTTGTAAAGAGAGGAAGGAAGTGGAGAAGGCATTGAAGAACATTAGGGTCTTTGTTTGCCACAGGGAAACTATGCAGAAATACTGTGTCTATGGCCTTACTGAAGAAGCTACTGAAAACATTTGGTTTGCTGATAGGGATGAAAAGAATTTAAGGCTTGTGAATTACTTTAAAGATCACTATAACTATGACATTCAATTCAGAAACTTGCCTTGCTTGCAAATTAGTAGAAGTAAACCATGTTATCTCCCTATGGAGCTTTGTGTGATCTGTGAAGGTCAGAAATTCCTTGGGAAGTTGTTTGATGATCAGACGGCAAAGATACTCAAGATGGGCTGCCAAAGACCGAGGGAACGAAGATCCATCATTGAAGGAGTCATGAGAGGGAATGTAGGGCCTACCAGtGGAAACCAGGAAAGGGAATTCAAACTCAAAGTGTCAAGAGAAATGACAAGGCTTACTGGGAGAATTCTTCACCCTCCCAAGCTGAAGCTTGGAGATGGAGGTCATATGAGGAATCTAATTCCTTCGCGCCACAACCGACAGTGGAACCTTCTCGACGGCCATGTCTTTGAAGGAACTAAAATTGAAAGGTGGGCACTAATAAGCTTTGGTGGTACACCTGAGCAGAAGTCCTACATCCCCAAATTCATAAACCAACTATCTCAAAGGTGTGAACAATTAGGCATTTTTCTTAACAAGAACACAATCATTAGTCCCCAATTTGAATCAAGCCAGGTTCTtaacaattttacccttttagAAACTAAGCTCAAGAAAATCCAAAGAAGTGCCTCAAACAATCTCCAGCTTCTTATCTGCATAATGGAGAGAAAACACAAAGGTTATGCAGACTTGAAAAGAATTGCTGAGACTAGTACTATTGGGGTTGTAAGCCAATGCTGCTTATACCCAAATCTCACGAAGTTAACTTCACAGTTTTTGGctaatttggccttaaaaatcaATGCAAAAGTTGGTGGATGCACAGTTACTCTATACAATTCACTTCCTTCTGAAATCCCAAGGCTATTTCAGATTGATGAGCCAGCTATTTTTATGGGTGCTGATGTAACACATCCTCATCCTCTTGATGATTTCAATCCATCTGTTGCTGCTGTTGTTGGAAGCATGAATTGGCCAAACTCAAACAAATACATTTCAAGAATAAGGTCCCAAACTCATCGACAAGAAATCATACAGGATCTTGGTGAAATGGTTGGTGAATTGCTTCATGATTTTTATCAGGAAGTGAAGAAACTCCCTAGCAGAATCATCTTCTTCAGAGATGGGATTAGTGAAACCCAATTTTATAAAGTACTGGGAGAGGAATTAGAATCCATCAATAGGGCATGCTCCAAATTTCATCAAAGTTATAAACCTTTCATTACTTTTGTAGTAGTACAGAAGAGGCATCACACAAGGTTGTTTCTTCCCTTTGAAACTACTGACCAGTCTTATATATATGAGAATAATATTCCTCCTGGGACTGTGGTTGATTCTGTGATCACTCACCCAAAAGAGTTTGATTTCTATTTGTGTAGCCATTGGGGTGTGAAAGGAACAAGCAGGCCTACTCATTACCATGTTTTGTGGGATGAAAATAAGTTCACTTCTGATGAACTTCAGAAgttggtttacaatttatgctTTACTTTTGTGAGGTGTACTAAGCCAATTTCTTTGGTCCCACCTGTTTATTATGCACATTTAGCAGCATATAGAGGTAGACTCTACCTAGAGAGATCTTCAGAGCCATCAGGTTTATACAGAAGAAGCACATCTACATTATCTAGAGCTGCTCCACCAAAGACAGAACCTTTACCCAAACTTAGTGAAAACATCAAGAAGCTCATGTTCTACTGCTAG 2979 0.3927 MEETEESSGNMKFTSQRRSLREEANSHEHLHHHYPALLPLPSPIPLKQLAFTPPFPQNHTIKSKTHLQNHPCKLNKNSSSDDKVSEATIAPVSHTNSAQIGLHLQTKAKASLKGDDGDGKKLISARRPDSGGKEGSVISLLANHFLVKFDSSQRIYHYSVEITPNPSKEISREIKQKLVDNNSACFSGAFPAYDGRKNLYSPIKLQNDKLEFYISLPIPTRKMTLPYEETHDLKEKNEQLKLFRINIKLVSNINGKDLSNYLSKDGDDWVPLPQDYLHALDVVLRENPSEKCVPIGRSFYSSSMGKTREIGGGAVGFRGFFQSLRPTQQGLSLNVDFSVTAFHESIGVIPYLQKRFEFLRDLSQRKTTSLTCKERKEVEKALKNIRVFVCHRETMQKYCVYGLTEEATENIWFADRDEKNLRLVNYFKDHYNYDIQFRNLPCLQISRSKPCYLPMELCVICEGQKFLGKLFDDQTAKILKMGCQRPRERRSIIEGVMRGNVGPTSGNQEREFKLKVSREMTRLTGRILHPPKLKLGDGGHMRNLIPSRHNRQWNLLDGHVFEGTKIERWALISFGGTPEQKSYIPKFINQLSQRCEQLGIFLNKNTIISPQFESSQVLNNFTLLETKLKKIQRSASNNLQLLICIMERKHKGYADLKRIAETSTIGVVSQCCLYPNLTKLTSQFLANLALKINAKVGGCTVTLYNSLPSEIPRLFQIDEPAIFMGADVTHPHPLDDFNPSVAAVVGSMNWPNSNKYISRIRSQTHRQEIIQDLGEMVGELLHDFYQEVKKLPSRIIFFRDGISETQFYKVLGEELESINRACSKFHQSYKPFITFVVVQKRHHTRLFLPFETTDQSYIYENNIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENKFTSDELQKLVYNLCFTFVRCTKPISLVPPVYYAHLAAYRGRLYLERSSEPSGLYRRSTSTLSRAAPPKTEPLPKLSENIKKLMFYC 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0908 992 MobiDBLite consensus disorder prediction 109 128 - -
Sto11g0908 992 SUPERFAMILY PAZ domain 340 498 IPR036085 GO:0005515
Sto11g0908 992 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 84 991 - -
Sto11g0908 992 CDD PAZ_argonaute_like 357 461 - -
Sto11g0908 992 SMART Piwi_a_2 641 951 IPR003165 GO:0003676
Sto11g0908 992 Gene3D paz domain 339 466 - -
Sto11g0908 992 PANTHER PROTEIN ARGONAUTE 7 84 991 - -
Sto11g0908 992 MobiDBLite consensus disorder prediction 109 133 - -
Sto11g0908 992 Gene3D - 714 992 IPR036397 GO:0003676
Sto11g0908 992 SMART DUF1785_2 293 345 IPR014811 -
Sto11g0908 992 MobiDBLite consensus disorder prediction 1 28 - -
Sto11g0908 992 CDD Piwi_ago-like 510 950 IPR045246 -
Sto11g0908 992 Pfam PAZ domain 357 470 IPR003100 GO:0005515
Sto11g0908 992 Pfam N-terminal domain of argonaute 138 284 IPR032474 -
Sto11g0908 992 ProSiteProfiles PAZ domain profile. 353 462 IPR003100 GO:0005515
Sto11g0908 992 SMART PAZ_2_a_3 353 484 IPR003100 GO:0005515
Sto11g0908 992 Pfam Argonaute linker 1 domain 294 343 IPR014811 -
Sto11g0908 992 Gene3D - 527 704 - -
Sto11g0908 992 ProSiteProfiles Piwi domain profile. 641 951 IPR003165 GO:0003676
Sto11g0908 992 SUPERFAMILY Ribonuclease H-like 628 951 IPR012337 -
Sto11g0908 992 Pfam Piwi domain 642 948 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0908 Sto-Chr11 9623064 9627000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0908 132 992 Eukaryotic Initiation Factors Gene Family AT1G48410 41.071 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0908 K11593 - gmx:100796107 1597.41