Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0901 ATGGGTGGAATTGGTGACCAACCGCCGTATACGGCGGCGCCGGGGCCACCACGGCGACCGACAATCGCGCTCCCGCCACGCACTTCCATGATGATGGACACGCTTTTTAATAATGGTGGGCCATCTGGCGGCGCCTTTGGTTTCAGCCCCGGTCCAATGACTCTGGTTTCGAGTTTATTCAACGAAAACGATGATTTCAAGTCCTTCTCGCAGCTTCTCGCCGGCGCGATGGCGTCGCCCGTGGCGGCGGCGGAGCAGAAGAGCTCCGGTGAAGTTGGCGGCGGCGGGCCGATGTTCACGATTCCGCCGGGGTTGAGTCCTGCTGGTTTGCTCGATTCGCCTGGGTTCTTTTCAGCTTCTCAGGGACCCTTTGGAATGTCACACCAGCGAGCCCTAGCACAGTTTACAGCTCAAGCTGTGCAGGAGAACTCTAATGTGCATATCCGAGATGAAAATCCATCTGTATCGGCAATGCCTGCAGGCACTTTCAATACTAGACAACACCAGGTGCAGCCCCACTCAATGCAAGACTCTGGTGCATCAATGAAGGAATGCCCTGATGATGGCTTCAACTGGCGCAAGTATGGACAGAAACAGGTGAAAGGGAGTGAGTTCCCTCGAAGTTACTATAAATGCACACATCCAAACTGCCCCGTGAAGAAGAAGGTCGAGCGATCTCTTGACGATGACCATGTTGTTGCAATCATTTACAAAGGGCAGCACAATCATCAACCTCCTCGCCCTAACAAGCAGCGAACAAAAGATGCAGCATTAACTTCAAATGAAAATCTAAATATGCAAGGGAATCTTGATCTGAAAGAAGGGATAGCTTGTGAGTCAGCAGCTGAGCAGGTATCAGAAGGATTGAGTGACAGTGAGGAAGCTGCTGATCATGAACCGGAAGTGGAGGAGAAAAATGATGAGCCAGACCCCAAGAGGAGGCAAGGAAACATAGAAACCAGGGTCTCTGATGCAGCCTCTTCTCATAGGACTGCCATGGAGCCTAGAATCATTGTACAGACAACAAGTGAAGTCGATCTCCTAGACGATGGTTATAGATGGCGCAAATATGGACAGAAAGTTGTTAAAGGCAACCCTTACCCAAGGAGCTACTACAAGTGCACTACCGCAGGTTGTAATGTCCGGAAGCATGTTGAAAGGGCTTCAACAGATCCTAAAGCTGTCATAACTACGTATGAAGGGAAACACAATCATGACGTGCCAGCAGCTAAAACTAATAGCCACACCATTGCCAACAACACTGCATCACAGCTAAAATCTCACAACGCCATAATACCAGAGAAGCATAGTTTCAGCAGTAGAGGTATTGGAACCAATGAGCAACAGCCTGTGGCACGTCTAAGGCTGAAGGAAGAACAGATAACCTAG 1389 0.5004 MGGIGDQPPYTAAPGPPRRPTIALPPRTSMMMDTLFNNGGPSGGAFGFSPGPMTLVSSLFNENDDFKSFSQLLAGAMASPVAAAEQKSSGEVGGGGPMFTIPPGLSPAGLLDSPGFFSASQGPFGMSHQRALAQFTAQAVQENSNVHIRDENPSVSAMPAGTFNTRQHQVQPHSMQDSGASMKECPDDGFNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLDDDHVVAIIYKGQHNHQPPRPNKQRTKDAALTSNENLNMQGNLDLKEGIACESAAEQVSEGLSDSEEAADHEPEVEEKNDEPDPKRRQGNIETRVSDAASSHRTAMEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTIANNTASQLKSHNAIIPEKHSFSSRGIGTNEQQPVARLRLKEEQIT 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0901 462 Gene3D WRKY domain 333 409 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto11g0901 462 Gene3D WRKY domain 173 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto11g0901 462 SUPERFAMILY WRKY DNA-binding domain 340 408 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto11g0901 462 ProSiteProfiles WRKY domain profile. 343 408 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto11g0901 462 MobiDBLite consensus disorder prediction 438 462 - -
Sto11g0901 462 ProSiteProfiles WRKY domain profile. 181 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto11g0901 462 MobiDBLite consensus disorder prediction 281 335 - -
Sto11g0901 462 SMART WRKY_cls 186 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto11g0901 462 SMART WRKY_cls 348 407 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto11g0901 462 MobiDBLite consensus disorder prediction 305 319 - -
Sto11g0901 462 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 461 IPR044810 GO:0003700
Sto11g0901 462 MobiDBLite consensus disorder prediction 1 22 - -
Sto11g0901 462 Pfam WRKY DNA -binding domain 349 405 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto11g0901 462 Pfam WRKY DNA -binding domain 187 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto11g0901 462 SUPERFAMILY WRKY DNA-binding domain 185 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto11g0901 462 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 15 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0901 Sto-Chr11 9575556 9580420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0901 19 462 WRKY Transcription Factor Family AT2G03340 53.321 6.53e-146 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto11g0901 WRKY 1.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0901 - - lang:109349541 546.584