Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0858 atGGAGGCTCTGTGTTTGCAAGTAGACAAGAAGTACCCAAGAGATCTCCTCCAGAGATTCATACCTACTACTAGTAGTGATACTAAATCCCAAAacgcagaagcagaagaagaggATCACGATGATTCGGAGGAAATAGAGCTAAATCTCGGCCTTTCATTGGGCGGTCGATTCGGCGTCGACAAGCACGCCGGAAGCAAGCTAGTTCGATCCTCCTCGATCGTCGGAACAATGCCCCTCCTACGAGAGAACCCCTCCACGACGTCGCCTCCCACGGCGTCGTATCCCTCCACTCTCATGAGGACTTCTTCGCTTCCCACGGAGACGGAGGAGGaatggaggaagaggaaggagtTGCAAACATTGAGGCGAATGGAGGCCAAGAGGAGAAGGTCCGAGAAGCAGAGGAATTCCAAGACGGAGAGAGAAGAAGGCGGTGGTCATGAAGCGGACGGCCCAAAAGGAAGTGGTCGGGCCTGTGGGCTACCCACCTGGGCTTCCGCTTCCGCTTCAGCTTCCTCCCCGGCTAGGCAAGTGGCTCTGAGCGATGTGTTGGCCGCCAGAGGAAAAGCCCATGGGCATGGGCTTGGGCTTTTGGGCGGGTCAGAATCGGAGAGCAAGCCTTCCCAAGGATCAAGTAGTTGTGGTGAAGCAAGAAGCCCTGCTAGTAATCAGCAGTTGCCACCGGAGAGAAACAATCTGGAAGCCGCCGGGGGTTCCTCCGGGACAAAGACAAATGAGAAAATGACCAAAACAGCCATCGAGGCGGATAATATCCCGACAAGGAGACCCCAAAATAGAGGTAGGGAAATCGGTTCGAACTCGATGGAAGACATGCCTTGTGTTTTTACACAAGGGGATGGGCCTAATGGAAAAAGAATAGAGGGAATCTTATACAGATATGGTAAAGGGCAAGAAGTGAGGATAATGTGTGTATGCCATGGGAATTTCCTGTCTCCAGCAGAGTTTGTGAAGCatgctggtggtggtgatgtTGTGAACCCTCTTAGGCACATTGTTGTGAACCCTAATTCTACTAActatttgtaa 1050 0.4867 MEALCLQVDKKYPRDLLQRFIPTTSSDTKSQNAEAEEEDHDDSEEIELNLGLSLGGRFGVDKHAGSKLVRSSSIVGTMPLLRENPSTTSPPTASYPSTLMRTSSLPTETEEEWRKRKELQTLRRMEAKRRRSEKQRNSKTEREEGGGHEADGPKGSGRACGLPTWASASASASSPARQVALSDVLAARGKAHGHGLGLLGGSESESKPSQGSSSCGEARSPASNQQLPPERNNLEAAGGSSGTKTNEKMTKTAIEADNIPTRRPQNRGREIGSNSMEDMPCVFTQGDGPNGKRIEGILYRYGKGQEVRIMCVCHGNFLSPAEFVKHAGGGDVVNPLRHIVVNPNSTNYL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0858 349 Pfam Putative nuclear localisation signal 99 207 IPR032310 -
Sto11g0858 349 MobiDBLite consensus disorder prediction 79 163 - -
Sto11g0858 349 MobiDBLite consensus disorder prediction 19 44 - -
Sto11g0858 349 Pfam Ethylene-responsive binding factor-associated repression 41 76 IPR012463 -
Sto11g0858 349 PANTHER AFP HOMOLOG 2 10 346 IPR031307 GO:0007165
Sto11g0858 349 Coils Coil 115 144 - -
Sto11g0858 349 Pfam Tify domain binding domain 307 341 IPR032308 -
Sto11g0858 349 MobiDBLite consensus disorder prediction 107 151 - -
Sto11g0858 349 MobiDBLite consensus disorder prediction 195 278 - -
Sto11g0858 349 PANTHER NINJA-FAMILY PROTEIN AFP1 10 346 - -
Sto11g0858 349 MobiDBLite consensus disorder prediction 203 249 - -
Sto11g0858 349 MobiDBLite consensus disorder prediction 79 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0858 Sto-Chr11 9270609 9272941 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0858 - - zju:107429065 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0858 11 9270609 9272941 Sto11g0858 11 9270609 9272941 ECH