Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0848 ATGAATTATAATGTGGATGACAAAGTTATTAGTGGCAGCATGGAGTTAGTTCCCCCATCTGACCACCTCTGCTATGTCCGTTGCAACTTCTGCAACACTGTGCTTGcggtTGGTATACCATGCAAGAGGTTGATGGAGAGTGTGACGGTGAAATGTGGACATTGCAGCAATGTGTCCCTTCTGAGCACAAGGCCTTCTTCCTCTCAACATCACAATactacttcttcttctccagATGATCACACAGTACTAAGCCTTCagGGGTTTTATAGTGAGTTGAAGAAGGGACaagcatcatcttcatcttcctcttctACTACTACATCTGGCGACCCTCCTCTCTCCCCCAAACCTCCTTCACCATTTGTTGTCAAACCACCTGAGAAGAAACACCGACTTCCATCTGCTTACAATCGTTTCATGAAAGAGGAGATACAGCGTATCAAAGCAGCCAATCCTGAGATCCCACACCGAGAAGCTTTCAGCGCTGCAGCCAAAAATCTGGAAAAAAGAAGCCGTCCTCGTTTTCCTGTTTTACTGGGAGATAATTTCTTTGCTGCTCCACCCTTTGAAGATGTGATGACAACTGGAAAAGGTCAACAGTGGCTCCATGTTCAGGGGGAAGACGATACTTGGCTTTTAATAGCTCTGATGAGAAAGGCTATATCTTCCTTTTACAATCACTACCTTAAAGAGTTTTCCCCTGTTCTTAGTGGGTCAAGGAGAGGGCATAAAGACAATAGCTTAATGAGTAGATGTAATCAAACTGAGGCTTCCTTCGGCGTTCATTGTGTCCTGCTAGGCGTCTACGACAACTTCGCTTACCATCATCAAACTCAGCTAACAAATGGAACCTAA 858 0.4219 MNYNVDDKVISGSMELVPPSDHLCYVRCNFCNTVLAVGIPCKRLMESVTVKCGHCSNVSLLSTRPSSSQHHNTTSSSPDDHTVLSLQGFYSELKKGQASSSSSSSTTTSGDPPLSPKPPSPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNLEKRSRPRFPVLLGDNFFAAPPFEDVMTTGKGQQWLHVQGEDDTWLLIALMRKAISSFYNHYLKEFSPVLSGSRRGHKDNSLMSRCNQTEASFGVHCVLLGVYDNFAYHHQTQLTNGT 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0848 285 PANTHER PROTEIN CRABS CLAW 13 171 - -
Sto11g0848 285 SUPERFAMILY HMG-box 114 165 IPR036910 -
Sto11g0848 285 MobiDBLite consensus disorder prediction 96 111 - -
Sto11g0848 285 PANTHER PROTEIN YABBY 6-RELATED 13 171 IPR006780 GO:0007275
Sto11g0848 285 MobiDBLite consensus disorder prediction 96 130 - -
Sto11g0848 285 Pfam YABBY protein 19 168 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0848 Sto-Chr11 9189240 9198893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0848 4 170 C2C2-YABBY Transcription Factor Family AT1G69180 55.952 7.30e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Sto11g0848 YABBY 5.6e-52 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0848 K25796 - gmx:100795791 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0848 11 9189240 9198893 Sto11g0848 11 9189240 9198893 ECH