Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0826 ATGCTGGTTTTGAAACCAGATGCAAAAGCTATTGACAAGGCTAGTGCAACAAGATCAAAACATTCAGTAACTGAGCAGCGGAGAAGGAGCAAGATAAATGAGAGATTTCAGACATTGAGGAATCTCATACCTCATAGTGATCAGAAGAGGGACACAGCATCATTCCTTTTAGAGGTGATTGAGTATGTCCAGTACTTACAGGAGAAGGTACAGAAGTATGAAGGCTCATATCAAGGTTGGACTAATGAGCCCACAAAGTTGATGCCATGGAGAAACAGTCACTGGCGTGCCCAAAGTTTAGTAGGCCAGCCTCAACCTGTGAATAATGGTTTGGGTCCAGTATCACCTTTTCCTGGAAAATTTGATGATGGCAACCTTAGTGTTTCTCCAAATATGCTTAGTAGTACCCATGATATGATAGATCCTGATCAGAGCAGGGATTTTGTCAGCAAAACAGTCGAGAGGCAATCTGAGTTAGCAAGCAGGGGAGTGCCTCTGCCGATGCCTATGCATGCAAACATGTCTGTTCCTGTTAGAAGTGATGGTGTACATGCCCATCCTCTTCAAGAACCTGTTTCTGATGCACAATTAATTGAATGTCCAGCCACTAGTGAACCACAAAACCAACATGATGAGCTGACAATTGAAGGAGGGACGATTAACATCTCAAGTGTGTACTCTCAGGGATTGTTGAATAATCTGACCCAAGCTCTACAGAGTGCTGGTTTAGATCTGTCACAGGCTAGCATCTCTGTTCAGATTAATCTCGGGAAGCAGGCAAATAATGAACCAAGCTGCGGGACATCCACTCCCAAGAATCATCATAATTCTTTTAGCAATCAAGCAGTTGCACATTTTAGAGATGCAGGCAGTGGTGAAGACTCTGATCAAGCTCAGAAAAGGTTGAAAAACATTAAGTGA 921 0.4311 MLVLKPDAKAIDKASATRSKHSVTEQRRRSKINERFQTLRNLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQGWTNEPTKLMPWRNSHWRAQSLVGQPQPVNNGLGPVSPFPGKFDDGNLSVSPNMLSSTHDMIDPDQSRDFVSKTVERQSELASRGVPLPMPMHANMSVPVRSDGVHAHPLQEPVSDAQLIECPATSEPQNQHDELTIEGGTINISSVYSQGLLNNLTQALQSAGLDLSQASISVQINLGKQANNEPSCGTSTPKNHHNSFSNQAVAHFRDAGSGEDSDQAQKRLKNIK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0826 306 Pfam Helix-loop-helix DNA-binding domain 18 67 IPR011598 GO:0046983
Sto11g0826 306 Gene3D - 14 87 IPR036638 GO:0046983
Sto11g0826 306 SMART finulus 22 72 IPR011598 GO:0046983
Sto11g0826 306 PANTHER TRANSCRIPTION FACTOR BIM2 6 303 - -
Sto11g0826 306 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 6 303 IPR044295 GO:0003700|GO:0006351|GO:0046983
Sto11g0826 306 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 87 IPR036638 GO:0046983
Sto11g0826 306 CDD bHLH_AtBIM_like 15 91 - -
Sto11g0826 306 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 16 66 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0826 Sto-Chr11 9051473 9053829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0826 7 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 58.431 1.65e-98 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto11g0826 HLH 1.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0826 - - gmx:100816055 482.256