Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0717 ATGTATCAATTGTTCCAGCTCCGAGCCTTGCGAGCCCTAGTGCAGAATAATCCACAAATATTACAGCCTATGGTTCAAGAGCTTGGGAAACAAAATCCCCAACTCATGAGATTGATTCAAGAGCATCAAGCTGACTTCCTTCGCCTGATAAACGAACCCGGGGAAGGTGGCAAGGGGAATATAATCGGGCAGCTGGCTAATGCCTTGCAAGAGCACACGGTATCTGTCACCCCTGAGGAGCGTGAAGCAATTGAACGtGCGAAGAATATTAAGCCTGCTATTGGTGAGCCAGAAGAAGTAgctataaaaattatttgtaatatTGACACTATGTACAAGGCTGGTTTGCATCTTCGGAACTGTGGTGTCCTCCATTGTGATATAAAGCCAGATAATATGTTGGTGAATGAGGCAAAAAATGTGTCGAAGCTTTGTGATTTTGGTAATGCCATGTTTGCTGGTATGAATGAAGTTACACCATACCTTGTGAGTCGCTTTTATCGTGCCCCTGAAATAAGTTGTTGTTTGTATGAACTCTATGCAGGGAAAGTTCTATTTCCAGGTCCTACAAACAATGATATGGTACGGCTTCACATGGAATTGAAGGGCCCTTTCCCCAAGAAGATGCTCCGTAGGGGCGCATTTATTGAACAAAAATTTTGA 663 0.4268 MYQLFQLRALRALVQNNPQILQPMVQELGKQNPQLMRLIQEHQADFLRLINEPGEGGKGNIIGQLANALQEHTVSVTPEEREAIERAKNIKPAIGEPEEVAIKIICNIDTMYKAGLHLRNCGVLHCDIKPDNMLVNEAKNVSKLCDFGNAMFAGMNEVTPYLVSRFYRAPEISCCLYELYAGKVLFPGPTNNDMVRLHMELKGPFPKKMLRRGAFIEQKF 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0717 220 Pfam Protein kinase domain 113 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0717 220 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 84 116 - -
Sto11g0717 220 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 117 220 - -
Sto11g0717 220 SMART serkin_6 47 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0717 220 SUPERFAMILY Protein kinase-like (PK-like) 111 211 IPR011009 -
Sto11g0717 220 PANTHER DUAL SPECIFICITY PROTEIN KINASE 84 116 - -
Sto11g0717 220 PANTHER DUAL SPECIFICITY PROTEIN KINASE 117 220 - -
Sto11g0717 220 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Sto11g0717 220 Gene3D - 2 54 IPR036353 GO:0003684|GO:0006289|GO:0043161
Sto11g0717 220 PRINTS DNA repair protein Rad23 signature 24 46 IPR004806 GO:0006289
Sto11g0717 220 PRINTS DNA repair protein Rad23 signature 74 90 IPR004806 GO:0006289
Sto11g0717 220 Pfam XPC-binding domain 6 54 IPR015360 GO:0003684|GO:0006289|GO:0043161
Sto11g0717 220 ProSiteProfiles Protein kinase domain profile. 1 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0717 220 Gene3D Transferase(Phosphotransferase) domain 1 81 220 - -
Sto11g0717 220 SUPERFAMILY XPC-binding domain 4 60 IPR036353 GO:0003684|GO:0006289|GO:0043161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0717 Sto-Chr11 8198803 8201481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0717 117 203 MAP Kinase Gene Family AT2G43790 36.538 1.17e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Sto11g0717 Pkinase 1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0717 K08827 - thj:104825736 197.593