Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0712 ATGGTTAGCTTATGCCTATGCTCTCTTCAGAAATCGCAACATCCAAATGGAGAGCTTGAATACGGTGAAGCCAACGATTTCGATGCGTTTGAGGCCCAAAAGGACTTGTTCTGGAGTAGTGTGCTTTGGTGGTTTTCATATACAACGATTTTCTCACCTTTTCATCTTTATAAGAGGGGATCTCACTTGATTTCACGGACTCTTTTTCACATTTTGCAAACATCTCGATTTTGTTCTTCTGTTTCCGTGTTTTGTgagATAAATGCCTACAAAAACGTGAATCGAAAGCCTTATCCCACCATTGGATTTGAGTACGGAATGTCGAGAAAACTTCGCATAATCTGTGACGACCCTGAAGCCACAGATTCATCTTCAAGCGAAGATGAAGCCGAGTGGataaagaaaccgaaaagggtAAAACGAATGGTTCATGAGCTccatcttcctcttcttcctgaGAAGAAGCCCAAGACTACTGAAGCTGATGGCTCTTTTCAGGAGAGTAACAATGGCGGAAAACAGGGCAAATCACTGATGAGGAAGCGTTCATCTTCAAAGTACAGAGGCGTTAGACTGAGAAACTCAGGTAAATGGGCTGCTGAGATTCGTCATCCTCTTCAAGGTCGAAAATGGTTAGGTACATTCAATACTCCTGAGGAGGCATCCCAAGCCTATGAGGCCAAAAGGATGGAGTTGGAAGCCATGGTTAAGTCTCTTCCTAGTCCTACTTCTAGTTCTGAAGCAGCCATGGTAGCCTCTAGAAAGAGCTTCTCTACTAGTCCTACTCCTTCTATATCTTCATCTTCAGTTTCATTCACATCTGAGGACTCTGAGAGTGTGTTTTCACAGACATCACCTCCTTCTGTGCTTGAAGTTTATACATCAACTGAGAAAGGTAATGGTAATGGTAACATTTCAATCAAAGAAGAAGCAGCCCATGATTTTGAGTCTGGATTTGCAGCTTTACCAATTCCTGATTTGAGTTTCCCACCTAAGGttgaaattaaagaagaagCTAATGATTTGGTGTTCCAAATGCCTGATCTGGGTATGATGAATGTGCCATTGCCATCTCCACCAGTTGATTTGGACTATTTCATGGTAGATAATTTTGGGCTAAGTTTTGAAGAGGATGATGATTTTGGTGACATATTGAACATGCAAATTTGTGGGTTTAATGAGGATGAACCAAGTGAGCTTCCTGATTTTGATTTTGGTGATTTTGGTGCTGATGATGAGTTTGCTGGTTGGATTGAAGAACCCCTCAACATAACTTGCGCATAA 1284 0.3988 MVSLCLCSLQKSQHPNGELEYGEANDFDAFEAQKDLFWSSVLWWFSYTTIFSPFHLYKRGSHLISRTLFHILQTSRFCSSVSVFCEINAYKNVNRKPYPTIGFEYGMSRKLRIICDDPEATDSSSSEDEAEWIKKPKRVKRMVHELHLPLLPEKKPKTTEADGSFQESNNGGKQGKSLMRKRSSSKYRGVRLRNSGKWAAEIRHPLQGRKWLGTFNTPEEASQAYEAKRMELEAMVKSLPSPTSSSEAAMVASRKSFSTSPTPSISSSSVSFTSEDSESVFSQTSPPSVLEVYTSTEKGNGNGNISIKEEAAHDFESGFAALPIPDLSFPPKVEIKEEANDLVFQMPDLGMMNVPLPSPPVDLDYFMVDNFGLSFEEDDDFGDILNMQICGFNEDEPSELPDFDFGDFGADDEFAGWIEEPLNITCA 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0712 427 ProSiteProfiles AP2/ERF domain profile. 186 242 IPR001471 GO:0003700|GO:0006355
Sto11g0712 427 SMART rav1_2 186 246 IPR001471 GO:0003700|GO:0006355
Sto11g0712 427 MobiDBLite consensus disorder prediction 162 178 - -
Sto11g0712 427 PRINTS Ethylene responsive element binding protein signature 187 198 IPR001471 GO:0003700|GO:0006355
Sto11g0712 427 PRINTS Ethylene responsive element binding protein signature 208 224 IPR001471 GO:0003700|GO:0006355
Sto11g0712 427 Gene3D AP2/ERF domain 185 235 IPR036955 GO:0003700|GO:0006355
Sto11g0712 427 SUPERFAMILY DNA-binding domain 185 232 IPR016177 GO:0003677
Sto11g0712 427 CDD AP2 185 227 IPR001471 GO:0003700|GO:0006355
Sto11g0712 427 Pfam AP2 domain 185 234 IPR001471 GO:0003700|GO:0006355
Sto11g0712 427 MobiDBLite consensus disorder prediction 153 190 - -
Sto11g0712 427 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 107 427 - -
Sto11g0712 427 Coils Coil 424 427 - -
Sto11g0712 427 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 107 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0712 Sto-Chr11 8127535 8131711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0712 91 426 AP2-EREBP Transcription Factor Family AT1G68550 32.759 1.80e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto11g0712 AP2 9.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0712 - - gmx:100306276 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g0712 11 8127535 8131711 Sto11g0712 11 8127535 8131711 ECH