Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0677 ATGTCTTTTCAAATCATAGACAATATTACCCTCTTCAGATGCAGCAACCATAATAACAACCTCAAAAACAACAGTACTGTCCCTAAATTTCACTTCTCCAGATATAACTGTCCTGGGTTCGATCTCTACTTCGATGATCCTCACAGAAAGAATGACACTACTGACCACAAGTCTCCTCCCACCTCTTTAAGTGCATGTTCTGTTATCCAGCTTCCACTCAATACGCAACCCAATGCCTCCTCCACCTTCAACGCCAGTGATCCCTTTACATTCTTAACTGCTGAGATACGCATAGAAGTAGCACTATCTGAGCCTTGTTATGTTTGTTATTATTTAAGAGGAGGACGATGTCGACTTGAAGGAGAATTGTGCAGTGTACATGAGGGCTCCGGCGAGAGTACTACACCAGGTTATAAGATTCTATCCGGTACAGCTACAGCTGCTGGAAGCATAGTGACGATGTTATTTGTGTTGTTTTTTATTCTACATCTGAAGGAGCAAAGATACAATTGGTCAGGCTTCCTAAATCAATCAAGAAGCGTTTACTTTGACATCGATCCATATACAAACCCAGAATGCCAAGATGTGGATTATGGGGTCCCTGTCTTCTCCTATGAGGACTTGGAAAGGGCAACTAACAGTTTTGATCAATCTAGAGAACTTGGAAGCGGAGGATTTGGAAATGTTTACTATGGAAAACTTGAAGATGCAAGGGAAGTAGCCATCAAGCGCCTATACGACCATAAGCGTGATAGCAAGCGTGTAAAACAGTTCATGAATGAAATTCAAATCCTCACACGCTTGCGCCACAGAAACCTTGTGTCTCTCTATGGATGCACTTCACATAGCAGTCAAAGACTACTGCAAGTATATGAATACATCCCAAATGGTACACTTGCTAGTCACCTAGCAAACCCTGGTTCACTACCATGGCCTGTACGGATGAAAATTGCCATAGAGACAGCCAGTGCATTGACCTATCTCCATGCTTCTGGCATCATCCATCGTGATGTCAAAACCAATAACATCCTTCTTGATGACAACTTCTGTGTTAAAGTTGGAGACTTTGGGATTTCAAGATTATCCCCCAGTGGTGTCACACATGTCACCACAGCTCCACAAGGAACCATGGGTTATGTTGACCCTGAATATCAAGAAAACTGCCACCTTACTGACAAGAGCGATGTGTATAGCTTCGGAGTTGTGCTCATTGAGCTGATTTCTTCTCTGCCGGCAATTGATTTCGAAAGGATTAATGTTCATGAGATTAAGTTGGCAAACCTAGCCATGAACAAGGTTCGAGGAAGGGCATTTAGTGAGCTGGTGGATCCTTCCCTTGGTTTTGAATCTGATAAGGACCAGAGTGGGAATTAA 1374 0.4287 MSFQIIDNITLFRCSNHNNNLKNNSTVPKFHFSRYNCPGFDLYFDDPHRKNDTTDHKSPPTSLSACSVIQLPLNTQPNASSTFNASDPFTFLTAEIRIEVALSEPCYVCYYLRGGRCRLEGELCSVHEGSGESTTPGYKILSGTATAAGSIVTMLFVLFFILHLKEQRYNWSGFLNQSRSVYFDIDPYTNPECQDVDYGVPVFSYEDLERATNSFDQSRELGSGGFGNVYYGKLEDAREVAIKRLYDHKRDSKRVKQFMNEIQILTRLRHRNLVSLYGCTSHSSQRLLQVYEYIPNGTLASHLANPGSLPWPVRMKIAIETASALTYLHASGIIHRDVKTNNILLDDNFCVKVGDFGISRLSPSGVTHVTTAPQGTMGYVDPEYQENCHLTDKSDVYSFGVVLIELISSLPAIDFERINVHEIKLANLAMNKVRGRAFSELVDPSLGFESDKDQSGN 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0677 457 SUPERFAMILY Protein kinase-like (PK-like) 200 414 IPR011009 -
Sto11g0677 457 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 29 452 IPR044652 -
Sto11g0677 457 ProSitePatterns Protein kinases ATP-binding region signature. 221 243 IPR017441 GO:0005524
Sto11g0677 457 Gene3D Phosphorylase Kinase; domain 1 188 293 - -
Sto11g0677 457 Gene3D Transferase(Phosphotransferase) domain 1 294 456 - -
Sto11g0677 457 ProSiteProfiles Protein kinase domain profile. 215 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0677 457 Pfam Protein kinase domain 216 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0677 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Sto11g0677 457 SMART serkin_6 215 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0677 457 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 29 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0677 Sto-Chr11 7797267 7800093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0677 10 452 Receptor kinase-like Gene Family AT1G25390 46.711 1.32e-112 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sto11g0677 PK_Tyr_Ser-Thr 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0677 - - csin:114298521 419.853