Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0650 ATGAGAAACACCAAAGAACCTTCTAGAAGTACAATCATCCCATTTTTCCTTCTCTCTGTACtagcctcctcctcctccttcttctccttcttcgtcCCCAAATCTCTTGCCCTAGAAGACGAAGCTCACCCCTATTACTGTACCGCTCAATGCGGAGATCTTCACAACATCAGCTACCCTTTCCGCCTTCGAGGCCAACCTTCGACCTGCGGCGATCCTGATTACACACTCTCCTGCGAGAATCGCCGAGCCGTGTTGGAATTAGGCGCCGGGAAGTACTTCGTGAAGTCGATCGACTACGAGAAGCAGGTAATCAGAGTCGTCGATGTCGATTTAGCCGATGGAGTGAGCTGTAGTCTCCCGTCGGCGTCTCTTGATTCGTGGCTCAACGGCGATATTCGTTATCGGAATACGGTGTACTCTCATATTGATGTAGGGTTTGTGAATTGCTCGAAGCCGATCAGTGATTCGACGTTTGTTAGGGTTCCTTGTATGAGTGGGAATAGGTCTATTGTTTATGCTGTTTATACCAGCGCTTATGTGTATGAGCACCAGGATTCTTGCTCCTTTCCGATTTCAACCACGCTTTTGAATTCTGATGTTGATGCGAAACCCCCTTCTTCCTATGAAGGGGTTCAGAAGCTCTTGCAGAATGGGTTTGATCTTGGATGGTCAGTAGAATGCAGGGATTGTATTGTTTCTGGTCGTGAATGCTCGTTTTACAGTGATCCTGAACCTTATTTTGAATGCCGCAAACCATATCGTTACCGTGATACTTTGATTAAAATTTACCTCTCTTTCTCTGCTATTGGTATCTGTGAGTCATTTAAATGGGATCAAATCTATCAGATTGCTCTGGGAGTAGCTAGAGGGATTGAGTATTTACATACAGGAACTGATTCATGCACTCTTCATCTTCACATTAAGCCTAGAAATATCCTTCTTGACCAAAACTTTGTCCCAAAAGTCTCAGATTTTGGCCTCACAAAGTTCCATCATGCTACTACTGGTTCTGAAGAAGCAGAAGCAAAGTACATGGCACCAGAAGTAATGTCAAGAAGGAACTATGCAGCTGCTAGTGTCAAATCAGATGTCTATAGTTTTGGAATGTTGGTGTTGGAAATACTCGAGGGGTTGAAGAATATTGGGGATTCAAGCTCAAGCAATTCATTTTCTGTATCTGTGATTTATGAGCGTTTGAGTAAGGGACAAGACTTGGAGCTTTGGAATAATGTGACAGAATGCGAAGCCACAATGGTAAGAAAGTTGTTGATGGTGGGATTATGGAGCATCCAAGCAAACCCATCTGAGCGTCCTTCCATGTCCAAAGTGGTGGAAATGCTGGAAGGTGATGATGCCATAGATGATGAATTTTCAAATCCTTCTTAA 1389 0.4269 MRNTKEPSRSTIIPFFLLSVLASSSSFFSFFVPKSLALEDEAHPYYCTAQCGDLHNISYPFRLRGQPSTCGDPDYTLSCENRRAVLELGAGKYFVKSIDYEKQVIRVVDVDLADGVSCSLPSASLDSWLNGDIRYRNTVYSHIDVGFVNCSKPISDSTFVRVPCMSGNRSIVYAVYTSAYVYEHQDSCSFPISTTLLNSDVDAKPPSSYEGVQKLLQNGFDLGWSVECRDCIVSGRECSFYSDPEPYFECRKPYRYRDTLIKIYLSFSAIGICESFKWDQIYQIALGVARGIEYLHTGTDSCTLHLHIKPRNILLDQNFVPKVSDFGLTKFHHATTGSEEAEAKYMAPEVMSRRNYAAASVKSDVYSFGMLVLEILEGLKNIGDSSSSNSFSVSVIYERLSKGQDLELWNNVTECEATMVRKLLMVGLWSIQANPSERPSMSKVVEMLEGDDAIDDEFSNPS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0650 462 SUPERFAMILY Protein kinase-like (PK-like) 274 451 IPR011009 -
Sto11g0650 462 PANTHER OS01G0113300 PROTEIN 274 450 - -
Sto11g0650 462 PANTHER OS01G0113300 PROTEIN 24 227 - -
Sto11g0650 462 ProSiteProfiles Protein kinase domain profile. 82 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0650 462 Gene3D Transferase(Phosphotransferase) domain 1 270 458 - -
Sto11g0650 462 Pfam Protein tyrosine and serine/threonine kinase 275 448 IPR001245 GO:0004672|GO:0006468
Sto11g0650 462 Pfam Wall-associated receptor kinase C-terminal 180 250 IPR032872 -
Sto11g0650 462 Pfam Wall-associated receptor kinase galacturonan-binding 47 109 IPR025287 GO:0030247
Sto11g0650 462 PANTHER RUST RESISTANCE KINASE LR10-RELATED 24 227 IPR045874 GO:0004672
Sto11g0650 462 PANTHER RUST RESISTANCE KINASE LR10-RELATED 274 450 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0650 Sto-Chr11 7583553 7585840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0650 276 451 Receptor kinase-like Gene Family AT5G38280 41.711 1.93e-38 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto11g0650 PK_Tyr_Ser-Thr 2.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0650 - - dzi:111282150 195.667