Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0648 ATGGGATTGCAGAACCAGTTAAGCGACTTCTCTTCGGGTTCGATTCCTCTCCTTCTTTTGGCTCAAATCGCAAACTGCATCAATTACCTCCGCTCCTTCCTCCTCGCTTTCCTCCGATCCCTCGGCCTTTCCAGATTCCACTCCAACCGAGTCGTCGTCGTCGACGATGCCTTCTTAACCGCCGTCGGATCGGGCTTCGCCGGCCTCATCATTTTCTCCGAGCAGCTCCACGCCAACCGCAACCTCTCCGATTCCTTCGTCGCCTCCGACGACGACTCCAAGTGTGTGGTGTGCCGGAGCAAGTACAGGGAGGGAGACCTGGTTCGGAGGCTGCCGTGCCGCCACGTCTTCCACAGAGGATGCTTCGATGGCTGGCTCGATCAACTCAAGTTCAACTGCCCTCTCTGCCGCTCGCCGCTCGTCTCCGACGAGCGCGTGGCGCTCACGGAGCGGCGCGTCGGTACGGAACTCTTGTCGTGGTTCTCTTTGCAGTGA 495 0.5919 MGLQNQLSDFSSGSIPLLLLAQIANCINYLRSFLLAFLRSLGLSRFHSNRVVVVDDAFLTAVGSGFAGLIIFSEQLHANRNLSDSFVASDDDSKCVVCRSKYREGDLVRRLPCRHVFHRGCFDGWLDQLKFNCPLCRSPLVSDERVALTERRVGTELLSWFSLQ 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0648 164 Pfam Ring finger domain 94 137 IPR001841 -
Sto11g0648 164 SMART ring_2 95 136 IPR001841 -
Sto11g0648 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 162 - -
Sto11g0648 164 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHA2A 1 162 - -
Sto11g0648 164 SUPERFAMILY RING/U-box 89 143 - -
Sto11g0648 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 152 IPR013083 -
Sto11g0648 164 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0648 Sto-Chr11 7571574 7572098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0648 1 164 C3H Transcription Factor Family AT1G15100 50.303 1.73e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0648 K16282 - gmx:100803789 208.379