Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0584 atgtctTCAAGCAATCTCGCAAAGTTGGAAGAAGCTTGTGTAGAATCTGGCTCTTGTGAATCTTCTGGGATGCTTCAAATAGCAcagaaaGCACTTGCTGAGTTGATTGGAACATACTTATTAGTATTTGCAGGGTGTTGTTCAGTGGTTTTGGAAAAACAACACGGGAATATAACATTTCCGggaatatgtttggtatggggATTTACCGTAATGTTCTTGATTTATACAATCGGCCACATTTCTGGCGCTCATTTTAATCCGGCCGTCACCGTCACTTTGACAATCTTACGAAAATTCCCATCCAATGAAGTGCCGTTGTATATAGCTGCACATGTGTTGGGATCAATACTTGCAAGTTTGTCATTGTATCTATTGTTTGGTACGACAGAGAAAGAGTTTTTTGGAACAGTACCATCAGGAAGTAATATTCAGTCTCTTATCTTTGAAATCATTACCACATTTCTCTTGCTATTTGTTGCCTGTGGCCTTTCTGACAAAAATGCGTTTGGACAATTAGGAGGGATCTCCGTAGGTTTGGTGGTTATAGTAGACGTCTTCATTGCCGgGCCTGTTTCAGGAGCATCAATGAATCCAGCAAGAACAATTGGGCCTGCAATTGTAATGGGCATATACAAAGGAATTTGGGTCTATATAGTTGGGCCTTTTGTTGGGGCCTTACTTGGAGCCTTGACTTACAACCTTATCAAAACACCTGAAAAAGATAAGCTCAAGAAATAG 741 0.386 MSSSNLAKLEEACVESGSCESSGMLQIAQKALAELIGTYLLVFAGCCSVVLEKQHGNITFPGICLVWGFTVMFLIYTIGHISGAHFNPAVTVTLTILRKFPSNEVPLYIAAHVLGSILASLSLYLLFGTTEKEFFGTVPSGSNIQSLIFEIITTFLLLFVACGLSDKNAFGQLGGISVGLVVIVDVFIAGPVSGASMNPARTIGPAIVMGIYKGIWVYIVGPFVGALLGALTYNLIKTPEKDKLKK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0584 246 ProSitePatterns MIP family signature. 85 93 IPR022357 -
Sto11g0584 246 Gene3D Glycerol uptake facilitator protein. 3 246 IPR023271 -
Sto11g0584 246 PRINTS Major intrinsic protein family signature 29 48 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g0584 246 PRINTS Major intrinsic protein family signature 67 91 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g0584 246 PRINTS Major intrinsic protein family signature 104 123 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g0584 246 PRINTS Major intrinsic protein family signature 149 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g0584 246 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g0584 246 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g0584 246 PANTHER AQUAPORIN NIP4-1-RELATED 14 242 - -
Sto11g0584 246 SUPERFAMILY Aquaporin-like 25 241 IPR023271 -
Sto11g0584 246 Pfam Major intrinsic protein 26 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g0584 246 TIGRFAM MIP: MIP family channel proteins 33 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g0584 246 CDD MIP 29 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g0584 246 PANTHER AQUAPORIN NIP2-1 14 242 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0584 Sto-Chr11 6977450 6979765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0584 8 241 Major Intrinsic Protein MIP AT5G37820 55.508 5.08e-92 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0584 K09874 - gmx:100819179 287.345