Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0570 ATGGCAGAAACTGTTGTAGAATTTGTGTTAAATGAACTCTTCCAAGTCCTAAAGGAGGAGTTCAATTTGCAAACAGGAGTGAAAAAAGAGTTGGAGAGTGTGAAAGACGAACTCGAATCCATAAGGGCTTTCTTGAAATACAACATTGAAGCCAACAAGTTGAAGTACCTCCTCCAAGACCTTGAAGCATGGGTGAAGCAAGTGAGGGATGTCGCTTTCGAGATAGAAGATGTCGTCGACGAGTTCTTGATCCGCTTTGCGAATCGCCTGAggaatgataatgatgatgatcatGGTAGTCCACACAAGAAGATTACTTGTGTTGCAAGCAACATTTCTTCCTCTATCAGAAACTGGAAATTTAACCACCGGATTGGTTCCGAGTTACGAAGCATCAAAACCAAAGTTGAGAAAATAGCAGACTATAGTCCAGCACTTCCAAGCCAAGGTTCATCAAGCGTGCTTCGAAGCAAGGTGATTGGAATTGATGGAAGCGAAGAATTAGTTGGCATAGAAGAACCTAAAAAGAAGCTGATGGAGTTGCTATCATATCATGACAGCGAACTCGAAGTGATTGCAATTGTTGGGGTGGGAGGACTAGGCAAAACCACCTTGGCAAATGAAATCTACAATGATATCAAGTTCGAGTTCGGAAGCCGAGCATTTGTAACAATTTCCCAATCATTCAAGCAAGAGGAGCTCCTAAAAGACCTAGCTCAACAACTTTTCTTTTATGAGAAAGATGTTCTTAAAGAAATTCACACAATGAGCATCCTTggattgaaagaaaaaatgatgaatttgCTTCAACATAGAAGGTATTTGATTGTGCTAGATGATGTGTGGGAAAAAGGGCATTGGGACAATTTAACAACTGGAATAATGCCCAAGAATGATTTTGGCAGCAGAGTTGTTTTAACAACTCGTAAAGAAGAGGTAGCGCGATACGCTATCGCGACCTTCGACTTCCGAGGGCAGGTCTATTATTTACCATTTTTATCTCAAGCTAATTCATGGAGGAGATGTGGAGGGCTTCCTCTTGCCATTTTAACACTAAGTGGTGTGTTGGTTACAAAAAATAAGCTACAGATTGAAGAGTGGGAAATGGTTCTCAACATTCTTAACATTCGTGGAGGACCAAAGAATCCTGACTACAATATGTTGGATAGAGTGCTTTCATTGGGCTTTGATGATTTGCCTTATTGTCTAAAGCCTTGTTTCTTGTCTTTGAGTATTTTCCCAGAAGACCACTTGATCAAACCTATGAGATTGGTCCGATTATGGATCTCAGAAGGCTTAATGATGAGGGAAAAAGATTATGGATCCACCATGACACTGGAGGAGATTGCAAAGAGCTATCTGTATCAACTTGTTGACAGAAGTTTGATACAAACTGTTGAATCCACAATCGATGGAAGGATCGTGTTTTGTCGCGTACACGACCTATTACACGAGACCGCTCTTCGAAAATGTAGAGAAGAACAAGGTTTACTTGAAGTAATCAAGTCCGACCAAGAAAATAACAACGCAACAAAGTGGCCGGAAAGAGTGCGACGATTGTCCATCCACCGGTATCATGACGGCGAATTTGAACACGTAGTAAGGAGTATTTTACCATCTCGCCTTCGTTCTCTCTTCCTATTCCAATCACATACCTCAACAATGTCAAAATTTTTAGGATCAGGAGGCTTTAAGTTGCTTAATGTGTTAGATATGAGAGGTGCACCATTGGAAATGTTTCCTGAAACTATTTCCAAATTGTTCCTCTTGAAGTATCTGAGCTTAAGAGATACAAAAATCTCTAGCCTTCCTGGTTCCATTGGGAATCTTCAAAGCTTAGAGACATTGGatctcaaacacacatatatcaCTGAGGTGCCATCTGTGATCTCGAATCTTCACAAACTTCGCCATCTTTTGATATGCCATTATGAGGAAATGGATCATCCAATTTTTAGTCAGAGTGGTGATTATTTGATTCGTGACATCCAAAGAATTCCAATTCCTGACATTAGTTATGGAGTGAAGATGAAGTTTCTTCCATGCAAAAGGAGACAACAAAGCACATTGAAAAAGCTACATCAATTGCATGGTTTCAAAGCAACGCCTACCATCATTAGAAGCCTTGTTTCACTACAAACGCTTTGCATTGTTGAAGcatgtgatgatgatgatgagttcATAAAGGCATTAGGGAGGTTGACCCAATTAAGAAGGCTATCTTTGGTGAATCTGAAAGGGAAACATTGGAGTGCTCTATGTTCTTCTATCTCAAAATTGAGAAATCTTCATTCTCTACTTCTTCATACCAATCAAGAATTTGATTTGGAGGGTTTGAGGTCCCCACCTCCACTTCTTCAAAGGTTGTATTTGAATGGGAAGCTTGTGAAGTTACCCAATTGGTTGAGTTCCTTACATAAATTGCAAGTGTTGCACTTAGTAGGTACTCAGCTTATTGAAAATCCTAGTCAATGTCTTCAAAACTTACCTAGTTTGGTATTCATTGGACTTTACAATGCTTTGGCTGAATGGCGCTTGAGCATGTCAAATGTTGCCTTTCAAAGATTGAACATTGGTGTGGCAGATTTAGTAGAGGTTCATGTTGGACGTAACGAATATGTTTTTTTCTCTAATGGTAAGGTAGGGCTTGACTTTGAGGGATCAAGGGCTTTTCGGGAGTTATATGGCTTTGGAGGTGAACCTTCTGTTTTGGAAATAATGCATGAAGATCAAAGCGCCATAATGAAAATATACAAAGACATCCCCAACCTGTAA 2775 0.3885 MAETVVEFVLNELFQVLKEEFNLQTGVKKELESVKDELESIRAFLKYNIEANKLKYLLQDLEAWVKQVRDVAFEIEDVVDEFLIRFANRLRNDNDDDHGSPHKKITCVASNISSSIRNWKFNHRIGSELRSIKTKVEKIADYSPALPSQGSSSVLRSKVIGIDGSEELVGIEEPKKKLMELLSYHDSELEVIAIVGVGGLGKTTLANEIYNDIKFEFGSRAFVTISQSFKQEELLKDLAQQLFFYEKDVLKEIHTMSILGLKEKMMNLLQHRRYLIVLDDVWEKGHWDNLTTGIMPKNDFGSRVVLTTRKEEVARYAIATFDFRGQVYYLPFLSQANSWRRCGGLPLAILTLSGVLVTKNKLQIEEWEMVLNILNIRGGPKNPDYNMLDRVLSLGFDDLPYCLKPCFLSLSIFPEDHLIKPMRLVRLWISEGLMMREKDYGSTMTLEEIAKSYLYQLVDRSLIQTVESTIDGRIVFCRVHDLLHETALRKCREEQGLLEVIKSDQENNNATKWPERVRRLSIHRYHDGEFEHVVRSILPSRLRSLFLFQSHTSTMSKFLGSGGFKLLNVLDMRGAPLEMFPETISKLFLLKYLSLRDTKISSLPGSIGNLQSLETLDLKHTYITEVPSVISNLHKLRHLLICHYEEMDHPIFSQSGDYLIRDIQRIPIPDISYGVKMKFLPCKRRQQSTLKKLHQLHGFKATPTIIRSLVSLQTLCIVEACDDDDEFIKALGRLTQLRRLSLVNLKGKHWSALCSSISKLRNLHSLLLHTNQEFDLEGLRSPPPLLQRLYLNGKLVKLPNWLSSLHKLQVLHLVGTQLIENPSQCLQNLPSLVFIGLYNALAEWRLSMSNVAFQRLNIGVADLVEVHVGRNEYVFFSNGKVGLDFEGSRAFRELYGFGGEPSVLEIMHEDQSAIMKIYKDIPNL 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0570 924 SUPERFAMILY L domain-like 478 840 - -
Sto11g0570 924 CDD RX-CC_like 2 141 IPR038005 -
Sto11g0570 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 409 IPR027417 -
Sto11g0570 924 Pfam Leucine rich repeat 590 641 IPR001611 GO:0005515
Sto11g0570 924 Gene3D Ribonuclease Inhibitor 668 871 IPR032675 -
Sto11g0570 924 Gene3D - 391 491 IPR036388 -
Sto11g0570 924 Gene3D - 5 126 - -
Sto11g0570 924 Gene3D Ribonuclease Inhibitor 506 654 IPR032675 -
Sto11g0570 924 PANTHER OS08G0539900 PROTEIN 161 841 - -
Sto11g0570 924 PANTHER OS08G0539900 PROTEIN 1 92 - -
Sto11g0570 924 PRINTS Disease resistance protein signature 191 206 - -
Sto11g0570 924 PRINTS Disease resistance protein signature 268 282 - -
Sto11g0570 924 PRINTS Disease resistance protein signature 342 356 - -
Sto11g0570 924 PRINTS Disease resistance protein signature 608 624 - -
Sto11g0570 924 Pfam NB-ARC domain 172 327 IPR002182 GO:0043531
Sto11g0570 924 SMART AAA_5 188 333 IPR003593 -
Sto11g0570 924 Gene3D - 157 320 IPR027417 -
Sto11g0570 924 PANTHER DISEASE RESISTANCE PROTEIN RP 1 92 IPR044974 GO:0006952
Sto11g0570 924 PANTHER DISEASE RESISTANCE PROTEIN RP 161 841 IPR044974 GO:0006952
Sto11g0570 924 Pfam Rx N-terminal domain 5 89 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0570 Sto-Chr11 6839238 6842090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0570 168 313 WRKY Transcription Factor Family AT4G12020 27.517 3.25e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0570 K13457 - qsu:112017093 547.354