Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0550 TTGTCTGTGATTGATTGTTTTGGTGAATCTAGGAAGCGaggtgatgaagaagatgaacaaaGTCAAGTAATTTCACTGCCAGCTATTGGGAACATTGATACAAGTGGAATAAGCATGCTTGAAGATGTCAAGAAGACTGCAAAAAGAATAGGACTACAAATTGTTTTGGTGAATCTAGGAAGCGaggtgatgaagaagatgaacaaaGTCAAGAAGCGaggtgatgaagaagatgaacaaaGTCAAGTAATTTCACTGCCAGCTATTGGGAACATTGATACAAGTGGAATAAGCATGCTTGAAGATGTCAAGAAGACTGCAAAAAGAATAGGACTACAAATTGTTTTGGTGAATCTAGGAAGCGaggtgatgaagaagatgaacaaaGCCAAGTTGTTTTGCTCTGTAAATACTgcgtttaattttttattttttggcttgGAAAATCTCTTAGAATCCTAG 462 0.2857 LSVIDCFGESRKRGDEEDEQSQVISLPAIGNIDTSGISMLEDVKKTAKRIGLQIVLVNLGSEVMKKMNKVKKRGDEEDEQSQVISLPAIGNIDTSGISMLEDVKKTAKRIGLQIVLVNLGSEVMKKMNKAKLFCSVNTAFNFLFFGLENLLES 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0550 153 SUPERFAMILY SpoIIaa-like 76 137 IPR036513 -
Sto11g0550 153 Pfam STAS domain 80 138 IPR002645 -
Sto11g0550 153 Pfam STAS domain 15 73 IPR002645 -
Sto11g0550 153 ProSiteProfiles STAS domain profile. 1 67 IPR002645 -
Sto11g0550 153 ProSiteProfiles STAS domain profile. 83 153 IPR002645 -
Sto11g0550 153 PANTHER SULFATE TRANSPORTER 11 75 IPR001902 GO:0015301|GO:0016020|GO:0055085
Sto11g0550 153 SUPERFAMILY SpoIIaa-like 16 70 IPR036513 -
Sto11g0550 153 PANTHER SLC26A/SULP TRANSPORTER-RELATED 11 75 - -
Sto11g0550 153 Gene3D STAS domain 75 145 IPR036513 -
Sto11g0550 153 Gene3D STAS domain 4 74 IPR036513 -
Sto11g0550 153 PANTHER SLC26A/SULP TRANSPORTER-RELATED 77 143 - -
Sto11g0550 153 PANTHER SULFATE TRANSPORTER 77 143 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0550 Sto-Chr11 6647870 6649358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0550 20 69 Inorganic Solute Cotransporters AT4G02700 54.000 8.24e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0550 K17471 - ini:109173765 71.6329