Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0486 ATGGCCATCAGCAGCTTTGTGTCTCTCGATGGGAGAAAACGAAGAAACTTCAATGTTTCAGTTTCATCCAATTTCAATATCTTGAACACAATCAAATACTCATCTTTATTCATGGATAGAAACAAGGACTCAAAAGATCTACAAAGATATGATGCTTTGAGGAAAATAGCTGCTAAAGACCGTAAAGGAGGCTTTGGAGCAGTCTACAAGGGGAAGCTGAAGAATGGGAAAGAGATTGCAGTGAAGAAGTTGTCAAATGCAACACCACAAGTAACAAGGAAGTTCCATGAAGAGGCCAATGTGTTGACCGGCTTGCAACATTGCAATGTGGTGAAATTGATTGGTTATTGCGCTCATAACAAtgattatttacttgtttatgagTTTCTTCCACATAGTCTTGATCAGTGTTTTTCTAGTAGCAATGAGACAAAGCAGCTTGATTGGACTAAAAGGTTTGGCATAATCAATGATATAGCTAAGGGTTTGCGATATCTTCACTTTGATAATAGAGACCGCATTGTTCATGGTGACATAAAACCCAGCAATATCTTGCTTGATCAAGAGTTGAAGGCAAAAATTGCTGAGTTTGGCATTAGATGTTTCTTCCCAGAAGATCGAACCCATGACACTGCTACAGATAAAATTGGAACACCTTCTGCTAAGTATTTTATTCATATTGTAAAAGCTTTTGAAAATAATATGCCTCTAGAGTATTTACATAACATTGCATACGAACTTTACACAAATGGTAGAAGCTTGGAATTTTTAGACCCTGCCATAGCAGCAGATCTCACAGTGAGAGACACTGAGCAAGTAATTAGGTGCATTGAAATAGCTTTGTTATGCGTTCAAAGTGTTTCAAAGGTGTTTCAAAGGCACGCCTTGACATGA 894 0.3725 MAISSFVSLDGRKRRNFNVSVSSNFNILNTIKYSSLFMDRNKDSKDLQRYDALRKIAAKDRKGGFGAVYKGKLKNGKEIAVKKLSNATPQVTRKFHEEANVLTGLQHCNVVKLIGYCAHNNDYLLVYEFLPHSLDQCFSSSNETKQLDWTKRFGIINDIAKGLRYLHFDNRDRIVHGDIKPSNILLDQELKAKIAEFGIRCFFPEDRTHDTATDKIGTPSAKYFIHIVKAFENNMPLEYLHNIAYELYTNGRSLEFLDPAIAADLTVRDTEQVIRCIEIALLCVQSVSKVFQRHALT 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0486 297 PANTHER RECEPTOR-LIKE KINASE 230 289 - -
Sto11g0486 297 PANTHER RECEPTOR-LIKE KINASE 57 209 - -
Sto11g0486 297 SUPERFAMILY Protein kinase-like (PK-like) 61 219 IPR011009 -
Sto11g0486 297 SMART serkin_6 50 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0486 297 Pfam Protein kinase domain 62 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0486 297 ProSiteProfiles Protein kinase domain profile. 54 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0486 297 Gene3D Phosphorylase Kinase; domain 1 61 130 - -
Sto11g0486 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Sto11g0486 297 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 57 209 - -
Sto11g0486 297 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 230 289 - -
Sto11g0486 297 Gene3D Transferase(Phosphotransferase) domain 1 132 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0486 Sto-Chr11 6121522 6125065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0486 62 285 Receptor kinase-like Gene Family AT4G23190 38.976 6.77e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto11g0486 Pkinase 5.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0486 - - pvy:116133479 192.586