Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0485 ATGGCTGCAGTACTATACACAAGACTTTATTGCTCCAAACCCATGGCGATCAGCAGTTTTGTTTCTCTGGAtgggagaaaaataaaaaacatcaaTGTTTCAGTTTCATCCAAGTTCAGTATCTTGAAAACAATCAAATCCTCATCTTCATTCATGGATAGAAACAAGAAACCAAAagAGCCACAAACATATGAAACTTTGGAGGAAATAGCTGCGAAAGACCGTAAGATCTTCTCCTTTGAAACCTTAGATGCTGCTACAACTAACTTCGGTGACTGCATAGGTAAAGGAGGCTTCGGAGCAGTCTACAAGGGGAGGCTGAAGAATGGGAAAGAGATTGCAGTGAAGAAGTTGTCAAATGCAACACCACAAGGGATAAGGGAGTTCCATGAAGAGGCCAACGTGTTGACTGGCTTGCAACATCGTAATGTGGTGAAATTGTTGGGTTATTGTGCTCATAACaatgattatttatttgtttacgAGTTTCTTCCATATAGTCTTGACCAGTTTTTATCCGGTAACAATGAGAAAAAGCAGCTCGATTGGACTGAAAGGTTTGGCATAATCAATGATATAGCTAAGGGTTTGCATTATCTTCACTTTGACAACAGAGACCGCATTGTCCATCGTGACATAAAGCCCAACAATATCTTGCTTGATCAAGAGTTGAAGGCAAAAATTGCCGACTTTGGCATTAGTCGTTTCTTCCCAGAAGATCGAACCCATGAAACTGCTAGCAAAGCAATTGGATCGCGATACTATAACTATATTCTACCGCTGTTGTCAGATGATGAAGCTCTCATTGTTGGATGGGCATACAAACTTCACACAAATGACAGAAGCTTAGAATTTTTAGACTCTGCTATAGCAAATCCCACAGTCACAGACATTGAACAAGTGATTAGATGCATTGAAATAGCTTTGTTATGCGTTCAAGGTGTTTCAACAGCACGCCCCGACATGAAGGATGTTATGTCCATGTTAACAGGGAATCATGGCCCTAGGGAAGCGTCATCTATTATTCTCAAACCTGGAATTTTGGGATATATTGAAGATCGGCGTGATCTTCGTTCCCAAGGTTGCTCAACACTCGAGAGAAATTTTACTCCTCATTATCATCTTTCtccgtaa 1134 0.3915 MAAVLYTRLYCSKPMAISSFVSLDGRKIKNINVSVSSKFSILKTIKSSSSFMDRNKKPKEPQTYETLEEIAAKDRKIFSFETLDAATTNFGDCIGKGGFGAVYKGRLKNGKEIAVKKLSNATPQGIREFHEEANVLTGLQHRNVVKLLGYCAHNNDYLFVYEFLPYSLDQFLSGNNEKKQLDWTERFGIINDIAKGLHYLHFDNRDRIVHRDIKPNNILLDQELKAKIADFGISRFFPEDRTHETASKAIGSRYYNYILPLLSDDEALIVGWAYKLHTNDRSLEFLDSAIANPTVTDIEQVIRCIEIALLCVQGVSTARPDMKDVMSMLTGNHGPREASSIILKPGILGYIEDRRDLRSQGCSTLERNFTPHYHLSP 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0485 377 SMART serkin_6 88 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0485 377 Gene3D Phosphorylase Kinase; domain 1 47 163 - -
Sto11g0485 377 ProSitePatterns Protein kinases ATP-binding region signature. 94 117 IPR017441 GO:0005524
Sto11g0485 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Sto11g0485 377 ProSiteProfiles Protein kinase domain profile. 88 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0485 377 PANTHER RECEPTOR-LIKE KINASE 264 338 - -
Sto11g0485 377 PANTHER RECEPTOR-LIKE KINASE 57 244 - -
Sto11g0485 377 Gene3D Transferase(Phosphotransferase) domain 1 166 260 - -
Sto11g0485 377 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 57 244 - -
Sto11g0485 377 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 264 338 - -
Sto11g0485 377 SUPERFAMILY Protein kinase-like (PK-like) 78 329 IPR011009 -
Sto11g0485 377 Pfam Protein tyrosine and serine/threonine kinase 90 247 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0485 Sto-Chr11 6112825 6117215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0485 51 364 Receptor kinase-like Gene Family AT4G05200 36.261 1.62e-62 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto11g0485 PK_Tyr_Ser-Thr 9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0485 - - nnu:104603522 253.447