Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0483 ATGGCTGCAGTACTATACACAAGACTTTATTGCTCCAAACCCATGGCGATCAGCAGTTTTGTTTCTCTCGAtgggagaaaaagaaaaaacatcaATGTTTCAGTTTCATCCAAGTTCAGTATCTTGAAAACAATCAAATCCTCATCTTCATTAATGGATAGAAACAAGAAATCAAAagAGCCACAAACATATGTAACTTTGGAGGAAATAGCTGCGAAAGACCGTAAGATCTTCTCCTTTGAAACCTTAGATGCTGCTACAGCTAACTTCAGTGACTTCATAGGTGAAGGATGCTTCGGAGCAGTCTACAAGGGGAGGCTGGAGAATGGGAAAGAGATTGCAGTGAAGAAGTTGTCAAATGCAACACCACAAGGGAAAAGGGAGTTCCATGAAGAGGCCAACGTGTTGACTGGCTTGCAACATCGCAATGTGGTGAAATTGTTGGGTTATTGCGCTCATAACaatgattatttatttgtttacgAGTTTCTTCCATATAGTCTTGACCAGTTTTTATCCGGTAGCAATGAGAAAAAGCAGCTCGATTGGACTGAAAGGTTTGGCATAATCAATGATATAGCTAAGGGTTTGCGTTATCTTCACTTTGACAACAGAGACCGCATTGTCCATCGTGACATAAAGCCCAACAATATCTTGCTTGATCAAGAGTTGAAGGCAAAAATTGCCGACTTTGGCATTAGTCGTTTCTTCCCAGAAGATCGAACCCATGAGACTGCTAGCAAAGCAATTGGATCGCGGAAGATATCTATATGTGGACATAGTTCTGCTCAGTATTTTATTCATATGGTACAAACACCAAATGCTTGTGAAAATGCAGTGTTATATGCCTCTGTATTTGGAACGTATTCATGTGTCAGTCAAAGATGGACGTATTTGTCTCTAGAGTATTTACGGAACATTGCATACAAACTTCACACAAATGGCAGAAGCTTAGAATTTTTAGACCCTGCTATAGCAGATCCCACAGTCACAGACGTTGAACAAGTGATTAGGTGCATTGAAATAGCTTTGTTATGCGTTCAAGGTGTTTCAACAGCACGCCCCGACATGGAGGATGTTATGTCCATGTTAACAGGGAATCATGGCCCTAGGGAAGCGTCATCTATTCTCAAACCTGGAATTTTGGGATATCTTGAAGATCGCAAAAAGATGAGCAATGCAGTGTTTGACAGATTGCAGTGA 1203 0.3965 MAAVLYTRLYCSKPMAISSFVSLDGRKRKNINVSVSSKFSILKTIKSSSSLMDRNKKSKEPQTYVTLEEIAAKDRKIFSFETLDAATANFSDFIGEGCFGAVYKGRLENGKEIAVKKLSNATPQGKREFHEEANVLTGLQHRNVVKLLGYCAHNNDYLFVYEFLPYSLDQFLSGSNEKKQLDWTERFGIINDIAKGLRYLHFDNRDRIVHRDIKPNNILLDQELKAKIADFGISRFFPEDRTHETASKAIGSRKISICGHSSAQYFIHMVQTPNACENAVLYASVFGTYSCVSQRWTYLSLEYLRNIAYKLHTNGRSLEFLDPAIADPTVTDVEQVIRCIEIALLCVQGVSTARPDMEDVMSMLTGNHGPREASSILKPGILGYLEDRKKMSNAVFDRLQ 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0483 400 Gene3D Transferase(Phosphotransferase) domain 1 166 376 - -
Sto11g0483 400 PANTHER RECEPTOR-LIKE KINASE 56 243 - -
Sto11g0483 400 PANTHER RECEPTOR-LIKE KINASE 303 373 - -
Sto11g0483 400 Gene3D Phosphorylase Kinase; domain 1 46 163 - -
Sto11g0483 400 Pfam Protein tyrosine and serine/threonine kinase 91 245 IPR001245 GO:0004672|GO:0006468
Sto11g0483 400 ProSiteProfiles Protein kinase domain profile. 88 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0483 400 ProSitePatterns Protein kinases ATP-binding region signature. 94 117 IPR017441 GO:0005524
Sto11g0483 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Sto11g0483 400 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 56 243 - -
Sto11g0483 400 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 303 373 - -
Sto11g0483 400 SMART serkin_6 88 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0483 400 SUPERFAMILY Protein kinase-like (PK-like) 75 364 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0483 Sto-Chr11 6090890 6096456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0483 54 400 Receptor kinase-like Gene Family AT4G23320 37.216 2.06e-65 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto11g0483 PK_Tyr_Ser-Thr 9.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0483 - - pvy:116133479 266.159