Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0482 ATGGCTGCAGTACTATGCACAAGACTTTATTGCTCCAAACCCATGGCGATCAGCAGTTTTGTTTCTCTCGAtgggagaaaaagaaaaaacatcaATGTTTCAGTTTCATCCAAGTTCAGTATCTTGAAAACAATCAAATCCTCATCTTCATTCATGGATAGAAACAAGAAATCCAAagAGCCACAAACATATGAAACTTTGGAGGAAATAGCTGCGAAAAACCGTAAGATCTTCTCCTTTGAAACCTTAGATGCTGCTACAACTAACTTCAGTGACTGCATAGGTAAAGGAGGCTTCGGAGCAGTCTACAAGGGGAGGCTGGAGAATGGGAAAGAGATTGCAGTGAAGAAGTTGTCAAATGCAACACCACAAGGGAAAAGGGAGTTCCATGAAGAGGCCAACGTGTTGACTGGCTTGCAACATCGCAATGTGGTGAAATTGTTGGGTTACTGCGCTCATAACaatgattatttatttgtttacgAGTTTCTTCCATATAGTCTTGACCAGTTTTTATCCAGTAGCAATGAGAAAAAGCAGCTCGATTGGACTGAAAGGTTTGGCATAATCAATGATATAGCTAAGGGTTTGCGTTATCTTCACTTTGACAACAGAGACCGCATTGTCCATCGTGACATAAAGCCCAACAATATCTTGCTTGATCAAGAGTTGAAGGCAAAAATTGCCGACTTTGGCATTAGTCGTTTCTTCCCAGAAGATCGAACCCATGAAACTGTTAGCAAAGCAATTGGAACGCGATACTATAACTATATTCTACCGCTGTTGTCAAATGATGAAGCTCTCATGGTTGGATCGGCATACAAACTTCACACAAATGGCAGAAGCTTAGAATTTTTAGACCCTGCTATAGCAGATCCCACGGTCACAGACATTGAACAAGTGATTAGGTGCATTGAGATAGCTTTGTTATGCGTTCAAGGTGTTTCAACAGCACGCCCCGACATGGAGGATGTTATGTCCATGTTAACAGGGAATCATGGCCCTAGGGAAGCGTCATCTATTCTCAAACCTGGAGTTTTGGGATATCTTGAAGATCGCCTTTCACTTCCGGCAAGCCCAACTCCCTTCTCCACCACCTCTATCACTTTGCTTTCTCCAAAGTATTTGAGATCGAGGAGGTCTGCAAGGCACACTACCAGGATTTCATCCTCGCCGTCGATGACCTTCGATCCCTCCTTTCTGACGTGGATTCCCTCAAGTCAGCTCTCTCTGATTCTAACTCCAAACTCCAGTCCGTTGCTCACCCACATTAATCTTGATCTCAATTTTGTGCGAACTTGTATTCAGTTGATGGAAGTTTGCTCGCCCTACAATTTCAAGAACTCTGTTTCACGGTATTGCGTAGAATTTGATGTCGTTTGGAGCAATCTCGATTCCGAATTGCGAGAGCGATACGGTGCGTTTGGATTGGACGGTGTTGAGGAGGAAGGAGGTGTTGAAGGAGGCGAGTCTTCTGTTGGATTCCCACAGCTTGAATGGTTCACGAAAGAGGATTCGCCGGCGGTGTCTGTGACGTTGACGTTGTCGGCGGTGTCCAGCGTTACTTGGAGAGCTTCGAAGTTGATTGACGCCAGAGGTATGACATGGAAGGTGTTGTAA 1620 0.4346 MAAVLCTRLYCSKPMAISSFVSLDGRKRKNINVSVSSKFSILKTIKSSSSFMDRNKKSKEPQTYETLEEIAAKNRKIFSFETLDAATTNFSDCIGKGGFGAVYKGRLENGKEIAVKKLSNATPQGKREFHEEANVLTGLQHRNVVKLLGYCAHNNDYLFVYEFLPYSLDQFLSSSNEKKQLDWTERFGIINDIAKGLRYLHFDNRDRIVHRDIKPNNILLDQELKAKIADFGISRFFPEDRTHETVSKAIGTRYYNYILPLLSNDEALMVGSAYKLHTNGRSLEFLDPAIADPTVTDIEQVIRCIEIALLCVQGVSTARPDMEDVMSMLTGNHGPREASSILKPGVLGYLEDRLSLPASPTPFSTTSITLLSPKYLRSRRSARHTTRISSSPSMTFDPSFLTWIPSSQLSLILTPNSSPLLTHINLDLNFVRTCIQLMEVCSPYNFKNSVSRYCVEFDVVWSNLDSELRERYGAFGLDGVEEEGGVEGGESSVGFPQLEWFTKEDSPAVSVTLTLSAVSSVTWRASKLIDARGMTWKVL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0482 539 Gene3D Transferase(Phosphotransferase) domain 1 166 258 - -
Sto11g0482 539 ProSitePatterns Protein kinases ATP-binding region signature. 94 117 IPR017441 GO:0005524
Sto11g0482 539 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 56 254 - -
Sto11g0482 539 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 264 354 - -
Sto11g0482 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Sto11g0482 539 SUPERFAMILY Protein kinase-like (PK-like) 74 329 IPR011009 -
Sto11g0482 539 SMART serkin_6 88 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0482 539 PANTHER RECEPTOR-LIKE KINASE 264 354 - -
Sto11g0482 539 PANTHER RECEPTOR-LIKE KINASE 56 254 - -
Sto11g0482 539 ProSiteProfiles Protein kinase domain profile. 88 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0482 539 Pfam Protein kinase domain 92 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0482 539 Gene3D Phosphorylase Kinase; domain 1 47 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0482 Sto-Chr11 6078706 6084031 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0482 54 374 Receptor kinase-like Gene Family AT4G23320 37.158 3.95e-64 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto11g0482 Pkinase 6.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0482 - - pvy:116133479 272.707