Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0481 ATGGCTATCAGCAGTTTTGTTTCTCTCGATGAGAGAAAACGAAAAAACTTCCATGTTTCAGTTTCATCCAAGTTCAATATCTTGAAAACAATTAAATCCTCATATTCATTCATGGATAGAAACAAGGAATCAAAAGAGCCGCAAAGGTATGAAACTTTGGAGACAATAGCTGCCAAAGACCGGAAGAAGTTCTCCTATGAAACCATAGATGCTGCTACCAATAAATTCAGTGACAACATAGGTGAAGGAGGCTCTGGATCAGTCTTCAAGGGGAGGCTGAAGGATGGGACAGAAATTGCAGTAAAGAAGTTGTCAAATATGACACCCCAAGGAAAAATGGAGTTCCTTAAAGAGGCCGAGGTGTTGACTGGCTCGCAACATCGTAATGTTGTGAAACTGCTGGGTTATTGCGCTCATAACAATgcttattttcttgtttacgAGTTTCTTCCATATAGTCTTAGCCAATTTTTATCCAGTAGCAATAAGACAAAGCAGCTTGATTGGACACAAAGGTTTGGCATAATCAAAGATATAGCTAGGGGTTTGCTTTATCTTCACGTTGACAATAGAGACCGTATTGTCCATTGTAACATAAAGCCCAGTAATATCTTGCTTAATCAAAACATGATGGCAAAAATTGCTGACTTTGGCCTTAGCCGTTTCTTCCCGGAAGATCGAACCCTTGTCACTACTACAAATGTGGCTGGAACATTAAGCTTAGAATTTTTGGACCCTGCAATAGCAGATACCACAGTCATAGACACTGAGGAAGTGATGAAGTGCATTGGAATAGCTTTGTTGTGCGTTCAAGGTGTTCCAACGGCACGTCCCGACGTGGAGGGTGTTATGTCCATGTTAATAGAGAATCATGGTCATTGGGAATCACCCTATATTCTCAAACCAGGAATTTTCAGTTATAGTGGTTATCGGTATGACATAAGTTCTGGCTTTAAGATGGCAGCAAAAGGCATACTTAAGGAATTCAATTGGACTACATATTTTGAGGAGTTCTGGTTTAAGGATTCAACTACTTATAGTAAAATTTTGGGACTCAAAATCAAACCTCTAAGATACTTTTTTGCGACAAAAAGACAACCAATGCAGTAA 1110 0.3883 MAISSFVSLDERKRKNFHVSVSSKFNILKTIKSSYSFMDRNKESKEPQRYETLETIAAKDRKKFSYETIDAATNKFSDNIGEGGSGSVFKGRLKDGTEIAVKKLSNMTPQGKMEFLKEAEVLTGSQHRNVVKLLGYCAHNNAYFLVYEFLPYSLSQFLSSSNKTKQLDWTQRFGIIKDIARGLLYLHVDNRDRIVHCNIKPSNILLNQNMMAKIADFGLSRFFPEDRTLVTTTNVAGTLSLEFLDPAIADTTVIDTEEVMKCIGIALLCVQGVPTARPDVEGVMSMLIENHGHWESPYILKPGIFSYSGYRYDISSGFKMAAKGILKEFNWTTYFEEFWFKDSTTYSKILGLKIKPLRYFFATKRQPMQ 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0481 369 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 42 238 - -
Sto11g0481 369 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 240 306 - -
Sto11g0481 369 ProSitePatterns Protein kinases ATP-binding region signature. 80 103 IPR017441 GO:0005524
Sto11g0481 369 Pfam Protein tyrosine and serine/threonine kinase 76 234 IPR001245 GO:0004672|GO:0006468
Sto11g0481 369 Gene3D Phosphorylase Kinase; domain 1 35 149 - -
Sto11g0481 369 PANTHER RECEPTOR-LIKE KINASE 240 306 - -
Sto11g0481 369 PANTHER RECEPTOR-LIKE KINASE 42 238 - -
Sto11g0481 369 SUPERFAMILY Protein kinase-like (PK-like) 60 288 IPR011009 -
Sto11g0481 369 ProSiteProfiles Protein kinase domain profile. 74 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0481 369 Gene3D Transferase(Phosphotransferase) domain 1 152 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0481 Sto-Chr11 6069630 6074425 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0481 63 303 Receptor kinase-like Gene Family AT4G23230 38.870 5.99e-53 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto11g0481 PK_Tyr_Ser-Thr 7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0481 - - cpap:110823801 213.772