Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0480 ATGACCAAATCTAACAGCTTTCTTCACAATCTCATGAAACCCTTCAAATTCGGATCTAGAAGAGAGGGAGGCAACGAGGAGGAATTAGAGAGAATTGCTGCACAGGAGCAGAAGATATTTTCCTATGACACGTTGCTTGCTGCTACCAAAAATTTTAACCCCCATCATAAGCTTGGAGAAGGAGGATTTGGACCTGTTTACAAGGGGAAGTTGGATGATGGAAGAGAGATTGCAGTAAAGAAGTTATCACAAAGTTCAAATCAAGGGAGCAAAGAGTTCATGAATGAGGCCAAGTTGTTAGCTCGTGTGCAGCACCGAAATGTGGTGAATTTGTTGGGATATTGTGTTCATGGCACAGAGAAGCTACTTGTGTATGAATATGTTCCACATGAGAGCCTTGACAAGCTTCTTTTCAAATCCCACAAGAGAGAACAGCTAGATTGGAAAAGGAGGCTTGACATAATCACAGGTGTAGCAAGAGGCCTGCTTTATCTACATGAAGACTCACACAACTGCATCATCCACAGAGACATCAAGGCCAGCAACATCTTGCTTGATGATAAGTGGGTCCCCAAGATTGCAGACTTTGGCATGGCTCGTCTCTTTCCTGAGGATCAAACCCATGTCAATACACGTGTGGCTGGAACCAATGGGTATATGGCTCCAGAGTATGTGATGCATGGGCATCTATCAGTGAAGGCAGACGTCTTTAGCTATGGCGTTTTGGTGCTGGAGCTGATAAGTGGCCAGAGAAACTCATCGTTTAGCCTTGAGGGGGATGCACATAATCTACTTGATTGGGCATACAAGCTTTACAAGAAAGGTAGGTGCTTAGAAATAGTGGATCCTGCACTAGCAGCATCAGCAGTAACAGATCAAATAGCAATGTGCATACAACTAGGTTTGCTATGCACTCAGGGGGACCCACAGCTGCGGCCGAGCATGCGGCGGGTGGTGGTGATGCTGTCGAAGAAGCCGGGACACATGGAAGAGCCGACCAGACCAGGAGTCCCGGGTTCCAGATACCGAAGACATCGTAGGCCCAATAATGGATTGACTTCCACAGCTGGTACTTCTGGTGGTGCTGACTCTGATTCACGTACTTCAGATTCAAGCAGTAACTATACAACAACTGCAACAGCAGGAACAAGCTCGGCTGCTCCAGAAGTACTCGACACTCGTGGAAAACGTCCCATACTTGAAGGTTGA 1209 0.4657 MTKSNSFLHNLMKPFKFGSRREGGNEEELERIAAQEQKIFSYDTLLAATKNFNPHHKLGEGGFGPVYKGKLDDGREIAVKKLSQSSNQGSKEFMNEAKLLARVQHRNVVNLLGYCVHGTEKLLVYEYVPHESLDKLLFKSHKREQLDWKRRLDIITGVARGLLYLHEDSHNCIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSVKADVFSYGVLVLELISGQRNSSFSLEGDAHNLLDWAYKLYKKGRCLEIVDPALAASAVTDQIAMCIQLGLLCTQGDPQLRPSMRRVVVMLSKKPGHMEEPTRPGVPGSRYRRHRRPNNGLTSTAGTSGGADSDSRTSDSSSNYTTTATAGTSSAAPEVLDTRGKRPILEG 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0480 402 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 377 - -
Sto11g0480 402 ProSiteProfiles Protein kinase domain profile. 52 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0480 402 PANTHER RECEPTOR-LIKE KINASE 3 377 - -
Sto11g0480 402 SMART serkin_6 52 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g0480 402 CDD STKc_IRAK 58 324 - -
Sto11g0480 402 Gene3D Transferase(Phosphotransferase) domain 1 128 333 - -
Sto11g0480 402 MobiDBLite consensus disorder prediction 349 387 - -
Sto11g0480 402 SUPERFAMILY Protein kinase-like (PK-like) 37 336 IPR011009 -
Sto11g0480 402 Gene3D Phosphorylase Kinase; domain 1 16 127 - -
Sto11g0480 402 Pfam Protein tyrosine and serine/threonine kinase 55 321 IPR001245 GO:0004672|GO:0006468
Sto11g0480 402 MobiDBLite consensus disorder prediction 322 402 - -
Sto11g0480 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0480 Sto-Chr11 6053451 6058420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0480 40 336 Receptor kinase-like Gene Family AT4G11530 52.843 1.57e-110 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto11g0480 PK_Tyr_Ser-Thr 5.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0480 - - zju:107429294 612.453