Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0477 ATGGCCCTTCAGGTCACCATGGACCAAGCCATTGAGGCTCACAAGCTTGTCTCCACCATGAAAATAATGGACAATAATGACTTCAATGGCGGCGACAACCGTGCCAAGTTAGCTTGGTCAGACTGCTTGGAGCTCTACGAAGACACAGTTTTTCAGTTGAACCGATCGGTCAGAAGTTATCCTGAGTGGGTTTTGGAGTCGGATCGGAAGTTGATCGAGGCAGCGCCGGGGGCACCGAGGCCTGATGTGGTGGTGGCGAAAGACGGGAGTGGGAACTACAAGACCATAGCGGAGGGGGTGGCGGCGGCAGCCAAGATGAGTGGTGGTGGAGGGAGGAGAGTGGTGGTGCATGTGAAGGGTGGTGTATATGCAGAGAACGTAGAGATTAAAAGGACAATGAAGAATTTGATGATCGTTGGAGATGGGATTGGTGTTACCATTGTTACAGGCAGCAAAAATGCTGGACAAACCACCACTTTTTCTTCTGCTACATTTGCTGTTTCTGGAGACAACTTCATCGCCCGCGACATAACCTTCGAGAACACCGCCGGACCGGCGAAGAACCAGGCGGTGGCTCTCCGCTGCGGCGCCGACCACGCCGTATTCCACCGCTGCGGCGCCGACCACGCCGTATTCCACCGCTGCAGCTTCCTTGGCTACCAAGACACCTTATACGTCCTCTCCCAGCGCCAATTCTACCGCGACTGCGACATCCACGGCACCGTCGACTTCATCTTCGGCGACGCCGCGGCCGTCTTCCAGCACTGCAACCTCAACGCCAGGAAGCCGATGGGCGGGCAGCAGAACGTGGTGACGGCGCATGGTAGGACCGACCCGAACGAGAACACGGGCATCATCATCCAAGGCTGCCGGGTGAACGGGCTGCCCGGCGCGAAGAACTACCTCGGGCGGCCGTGGAAGGAGTACGCGAGGACGGTGGTGATCGCGAGCGAGCTCGGCGGGATCCACCCGGCCGGGTGGTTGGAGTGGAGCGGAAGCTTTGCTCTGAAGACTCTGTACTACGCGGAGTATATGAATACCGGAGGCGGTGCTGCGACCGGAGGGAGGGTGAAGTGGCCGGGGTTTCATGTGCTGAGGAGCCCGGCGGAGGTGAGCAAATTCTCGGTGGGGAATTTCTTGGGCGGAGAGTCGTGGATTCCGGCCACGAACGTGCCATTTGACGCCGGGTTGTGA 1194 0.5846 MALQVTMDQAIEAHKLVSTMKIMDNNDFNGGDNRAKLAWSDCLELYEDTVFQLNRSVRSYPEWVLESDRKLIEAAPGAPRPDVVVAKDGSGNYKTIAEGVAAAAKMSGGGGRRVVVHVKGGVYAENVEIKRTMKNLMIVGDGIGVTIVTGSKNAGQTTTFSSATFAVSGDNFIARDITFENTAGPAKNQAVALRCGADHAVFHRCGADHAVFHRCSFLGYQDTLYVLSQRQFYRDCDIHGTVDFIFGDAAAVFQHCNLNARKPMGGQQNVVTAHGRTDPNENTGIIIQGCRVNGLPGAKNYLGRPWKEYARTVVIASELGGIHPAGWLEWSGSFALKTLYYAEYMNTGGGAATGGRVKWPGFHVLRSPAEVSKFSVGNFLGGESWIPATNVPFDAGL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0477 397 PANTHER PECTINESTERASE 59 396 - -
Sto11g0477 397 PANTHER PECTINESTERASE 2 57 - -
Sto11g0477 397 Gene3D - 78 397 IPR012334 -
Sto11g0477 397 SUPERFAMILY Pectin lyase-like 78 396 IPR011050 -
Sto11g0477 397 Pfam Pectinesterase 204 382 IPR000070 GO:0030599|GO:0042545
Sto11g0477 397 ProSitePatterns Pectinesterase signature 2. 238 247 IPR033131 -
Sto11g0477 397 Pfam Plant invertase/pectin methylesterase inhibitor 1 74 IPR006501 GO:0004857
Sto11g0477 397 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 1 63 IPR035513 -
Sto11g0477 397 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 59 396 - -
Sto11g0477 397 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 2 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0477 Sto-Chr11 6032680 6035210 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0477 1 70 Carbohydrate Esterase AT1G23200 42.857 6.76e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0477 - - lja:Lj4g3v3099630.1 436.417