Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0468 ATGGCCCTTCAGGTCACCATGGACCAAGCCATTGAGGCTCACAAGCTTGTCTCCACCATGAAAATAATGGACAACAATGACTTCAATGGCGGCGACAACCGTGCCAAGTTAGCCTGGTCAGACTGCTTGAAACTCTACGAAGATACAGTTTTTCAGTTGAACCGGTCGGTCAGCAGTTATCCTGAGTGGGTTTTGGAGTCGGATCGGAAGTTAATCGAGGCAGCGCCTGGGACACCGGGGCCAGATGTGGTGGTGGCGAAGGACGGGAGTGGGAACTACAAGAGTATAGCGGAAGGGGTGGCGGCGGCAGCGAAGATGGGTGGTGGTGGAGGGAGGAGAGTGGTGGTGCATGTGAAGGGTGGTGTGTATGCAGAGAACGTAGAGATTAAAAGGACAATGAAGAATTTGATGATAGTTGGAGATGGAATTGGTGTTACCATTGTTACGGGTAGCAAAAGTGCTGCACAAACCACCACTTTCTCTTCTGCTACATTTGCTGTTTCCGGCGACAACTTCATCGCCCGCGACATAACCTTCGAGAACACCGCCGGGCCGGCGAAGCACCAGGCGGTGGCTCTCCGCTGCGGCGCCGACCACGCCGTATTCCACCGCTGCAGCTTCCTTGGCTACCAAGACACCTTGTACGTCTACTCCCAGCGCCAATTCTACCGCGACTGCGACATCCACGGCACCGTCGACTTCATCTTCGGCGATGCGGCCGCGATCTTCCAGAACTGCAACATCAACGCCAGGAAGCCCATGGGCGGGCAACAGAACTCGGTGACGGCGCATGGGAGGTCCGACCCGAATGAGAACACGGGTATCATCATCCAAAACTGCCGGGTTAACGGGGCGCCCGGCACCAACAACTTCCTGGGGCGGCCGTGGAGGGAGTACGCGAGGACGGTGGTGATGGCGAGCGAGCTCGGGGGCATCCATCCGGCCGGGTGGTTGGAGTGGAGCGGAAGCTTTGCTCTGAAGACTCTGTACTACGCGGAGTATATGAATACCGGAGGCGGTGCTGCGACCGGAGGGAGGGTGAAGTGGCCGGGGTTCCATGTGCTGAGGAGCCCGGCCGAGGTGAGCGAGTTCTCGGTGGGGAATTTCTTGGGTGGGGAGTCGTGGATCCCCGGCGCCAACGTGCCGTTCGACGCCGGGTTGTGA 1164 0.5825 MALQVTMDQAIEAHKLVSTMKIMDNNDFNGGDNRAKLAWSDCLKLYEDTVFQLNRSVSSYPEWVLESDRKLIEAAPGTPGPDVVVAKDGSGNYKSIAEGVAAAAKMGGGGGRRVVVHVKGGVYAENVEIKRTMKNLMIVGDGIGVTIVTGSKSAAQTTTFSSATFAVSGDNFIARDITFENTAGPAKHQAVALRCGADHAVFHRCSFLGYQDTLYVYSQRQFYRDCDIHGTVDFIFGDAAAIFQNCNINARKPMGGQQNSVTAHGRSDPNENTGIIIQNCRVNGAPGTNNFLGRPWREYARTVVMASELGGIHPAGWLEWSGSFALKTLYYAEYMNTGGGAATGGRVKWPGFHVLRSPAEVSEFSVGNFLGGESWIPGANVPFDAGL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0468 387 PANTHER PECTINESTERASE 59 386 - -
Sto11g0468 387 PANTHER PECTINESTERASE 2 58 - -
Sto11g0468 387 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 59 386 - -
Sto11g0468 387 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 2 58 - -
Sto11g0468 387 SUPERFAMILY Pectin lyase-like 78 386 IPR011050 -
Sto11g0468 387 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 1 63 IPR035513 -
Sto11g0468 387 Pfam Pectinesterase 82 372 IPR000070 GO:0030599|GO:0042545
Sto11g0468 387 ProSitePatterns Pectinesterase signature 2. 228 237 IPR033131 -
Sto11g0468 387 Gene3D - 78 387 IPR012334 -
Sto11g0468 387 Pfam Plant invertase/pectin methylesterase inhibitor 1 70 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0468 Sto-Chr11 5912898 5915314 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0468 1 70 Carbohydrate Esterase AT1G23200 40.000 1.41e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0468 - - fve:101302349 434.106