Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0445 ATGGCTTCACATTTCTTCAAGATTATCCTTGAACGTTCTCTTCAAGATGGAAAGCTTCAagtaccaaacaattttatgaaGAAATATGGGGGTGATATGCCAAATCCTCTGTTTCTGAAGCCTCCGGATGGAACACTGTGGGAAATATTTTGGGAAAAGTATGATGATGGAGAGGTTTGGTTTGAGAAGGGTTGGAAGGAAGTTGCTGAACATTACTCTTTACAGCATGGCCATTTGGTGGTGTTCAAGTATGAGAAGGGAACTTGTCATATTGGGaagaagaagaaaactgaAGATAATCAGCAAAAGATGGATCAAGAAGATTCCAGCAAAAAATGCCCAAAATCCAAGGCTATTATTACTATTAAAGAAAGGATGAAACCATTAACATGTAGTGAAAAGGTGATGGCTTTAGAGAGAGTGAGTACTTTCATGTCTAAGAATCCCTATTTCAAGATTGTCATACAGCCATCATACATATTCAAGGCCTTGCCTCCGGATGGAACAATGTGA 513 0.3665 MASHFFKIILERSLQDGKLQVPNNFMKKYGGDMPNPLFLKPPDGTLWEIFWEKYDDGEVWFEKGWKEVAEHYSLQHGHLVVFKYEKGTCHIGKKKKTEDNQQKMDQEDSSKKCPKSKAIITIKERMKPLTCSEKVMALERVSTFMSKNPYFKIVIQPSYIFKALPPDGTM 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0445 170 CDD B3_DNA 4 90 IPR003340 GO:0003677
Sto11g0445 170 PANTHER B3 DOMAIN-CONTAINING 94 162 - -
Sto11g0445 170 PANTHER B3 DOMAIN-CONTAINING 3 89 - -
Sto11g0445 170 SMART B3_2 5 97 IPR003340 GO:0003677
Sto11g0445 170 ProSiteProfiles B3 DNA-binding domain profile. 4 97 IPR003340 GO:0003677
Sto11g0445 170 SUPERFAMILY DNA-binding pseudobarrel domain 4 88 IPR015300 -
Sto11g0445 170 Pfam B3 DNA binding domain 7 87 IPR003340 GO:0003677
Sto11g0445 170 Gene3D - 1 96 IPR015300 -
Sto11g0445 170 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 3 89 - -
Sto11g0445 170 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 94 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0445 Sto-Chr11 5638127 5639284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0445 5 89 B3 DNA Binding Superfamily AT3G18990 32.941 1.78e-15 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sto11g0445 B3 2e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0445 - - gmx:100793469 133.65