Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0444 ATGGCTTCCCATTTCTTCAAGATCATCCTTGAACGCTCTCTTCAAGATGGAAAGCTTCAAGTGCCAAACAATTTTATGAAGAAATATGGAGGCGATATGCCAAATCCTCTGTTCCTGAAGCCTCCAGATGGCACACTGTGGGAAATATTTTGGACAGAATATGAAGATGGTGGGGTTTGGTTTGATCAGGGATGGAAAGAAGTTGCCGAATATTACTCTCTAGACCATGGCCATTTGGTGGTGTTCAAATATGAGAAGGGAACTTGTCATATTGGGGTAAATATCTTTGATATGAGTGCCACTGAGATCAAATATCCCCTTCATGGAAACCTTGAACAAAATGGTGAtaatcatgatgatgatgaggaggatGATTCAGTTGAATTTCTATCTGAGATGcctcagaagaagaagaagaagaagaagaagaagaaggaacctGAAGAAGCTGAAACAACCTCCAATAAGCTAAAGATGCAAGAATTGGAAGAAGACATAGGTGGAAGTAGTTTTTCCACCAAAAAATGCCCAAAATCTAAGGCTGTTGTTTTTAAAGAAAAGATGATGAAACCATTAACACATGATGAAAAGGTCCAAGCTTTACAGAGAGTGAGTACTTTCAAGTCTAAGAATCCCTATTTCAAGATTGCCATTCAGCCAGCATACATATTCAATGGCTTGTGTGTACCAGCAAGATTTGTTCAGCAGTATTTGAAGAACAAGGAGGAGGTAGGAGATGTCCTCCTCAAGGTTTCTGATGGGAGAAGTTGGTTTGCTAGGTACAAAATTTGGGTGAATGAAGTGGATGCAGAGCTTGAACTCCATCATCTTCGtgttcatcatcaccatcatcgtAGGCCTCGAATTGGACTTGAACTCCATCCGCCGCAGTGGACGCAGAGCTTTCAGCATCGCCGCCGCCAGAATCTCCCTTCCTTTCGTCTGCGGCATTGGCGTTGCCATCGTCCTCCGCAAAACTGTCGATTATGA 990 0.3879 MASHFFKIILERSLQDGKLQVPNNFMKKYGGDMPNPLFLKPPDGTLWEIFWTEYEDGGVWFDQGWKEVAEYYSLDHGHLVVFKYEKGTCHIGVNIFDMSATEIKYPLHGNLEQNGDNHDDDEEDDSVEFLSEMPQKKKKKKKKKKEPEEAETTSNKLKMQELEEDIGGSSFSTKKCPKSKAVVFKEKMMKPLTHDEKVQALQRVSTFKSKNPYFKIAIQPAYIFNGLCVPARFVQQYLKNKEEVGDVLLKVSDGRSWFARYKIWVNEVDAELELHHLRVHHHHHRRPRIGLELHPPQWTQSFQHRRRQNLPSFRLRHWRCHRPPQNCRL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0444 329 MobiDBLite consensus disorder prediction 109 159 - -
Sto11g0444 329 MobiDBLite consensus disorder prediction 144 159 - -
Sto11g0444 329 SMART B3_2 5 99 IPR003340 GO:0003677
Sto11g0444 329 SUPERFAMILY DNA-binding pseudobarrel domain 207 264 IPR015300 -
Sto11g0444 329 Gene3D - 192 276 IPR015300 -
Sto11g0444 329 Pfam B3 DNA binding domain 12 88 IPR003340 GO:0003677
Sto11g0444 329 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 3 266 - -
Sto11g0444 329 SUPERFAMILY DNA-binding pseudobarrel domain 4 98 IPR015300 -
Sto11g0444 329 Gene3D - 1 100 IPR015300 -
Sto11g0444 329 PANTHER B3 DOMAIN-CONTAINING 3 266 - -
Sto11g0444 329 CDD B3_DNA 4 97 IPR003340 GO:0003677
Sto11g0444 329 ProSiteProfiles B3 DNA-binding domain profile. 4 99 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0444 Sto-Chr11 5628838 5633865 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0444 5 238 B3 DNA Binding Superfamily AT3G18990 25.442 3.00e-24 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sto11g0444 B3 7.5e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0444 - - lja:Lj5g3v0508090.1 191.43