Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0393 ATGATGGGGAACAATAGAGGAGAGGGGCATTGTACGCGGAGGACAGACTTGAGGTGGATTTGGTGGATTCTCGGAGCAAGAGAAGGAGAGAGCTCTTGGTCAAAGGCTATACGTCATGAAGATATTTGGAGAAATAGAAATTATGAGATGGTTTTTGGGCTGCACATTGATTCGTTTTTCCTACTGATATCAGTTCCTTCACTTTGCCAGTTCAACATTGCCAATCCCACTACGGGGTGCCAGAAGAAGCTGGAAATTGATGATGATGCTAAACTCCGAGCATTTTGGGACAAGAGGATATCACAAGAAGTCAGTGGAGATGCTCTGGGTGAGGAGTTTAAGGGCTATGTTTTCAAAATAACTGGAGGCTGTGACAAACAGGGTTTTCCAATGAAGCAGGGTGTGCTGACTCCTGGCCGTGTTCGTCTCTTGCTGCACAGAGGAACTCCTTGCTTCCGTGGTTATGGCAGAAGGAATggagagaggaggaggaagtCTGTTCGCGGATGTATTGTCAGTCCAGACCTCTCTGTTCTTAACTTGGTTATTGTGAAGAAAGGTGAGAATGATCTTCCTGGATTGACTGACATTGAGAAGCCAAGAATGAGGGGACCCAAAAGGGCTTCTAAGATTAGGAAATTGTTTAATCTCTCCAAGGAGGATGATGTACGCAAATATGTCAACACCTATCGCAGAACCTTTACAACCAAGACTGGCAAGAAGGTCAGCAAAGCTCCCAAAATTCAGAGGTTGGTCACTCCCTTGACTTTGCAAAGGAAGCGAGCAAGGATTGCCgataagaagaagagaatcgCGAAGGCCAAGTCAGAGGCTGCTGAATATCAGAAGCTCCTCGCCAGCCGATTGAAGGAACAGCGTGAACGTCGCAGTGAGAGCTTGGCCAAGAGAAGATCCAAGCTGTCTGCTGCATCAAAGCCATCAGCAGCTACTGCCTAA 957 0.4504 MMGNNRGEGHCTRRTDLRWIWWILGAREGESSWSKAIRHEDIWRNRNYEMVFGLHIDSFFLLISVPSLCQFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVSGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSAASKPSAATA 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0393 318 MobiDBLite consensus disorder prediction 287 318 - -
Sto11g0393 318 Coils Coil 257 284 - -
Sto11g0393 318 SMART Ribosomal_S6e_2 69 196 IPR001377 GO:0003735|GO:0005840|GO:0006412
Sto11g0393 318 PANTHER 40S RIBOSOMAL PROTEIN S6 70 316 IPR001377 GO:0003735|GO:0005840|GO:0006412
Sto11g0393 318 Gene3D - 201 302 - -
Sto11g0393 318 Pfam Ribosomal protein S6e 70 196 IPR001377 GO:0003735|GO:0005840|GO:0006412
Sto11g0393 318 PANTHER 40S RIBOSOMAL PROTEIN S6 70 316 - -
Sto11g0393 318 MobiDBLite consensus disorder prediction 287 305 - -
Sto11g0393 318 ProSitePatterns Ribosomal protein S6e signature. 120 131 IPR018282 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0393 Sto-Chr11 5018557 5023437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0393 70 316 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 71.774 1.06e-117 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0393 K02991 - gmx:100804076 409.453