Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0359 ATGGCATTCTTCTTTGCTCTTTCTTTTGCATTGGTTGTTGGACATGGCAACAAATTAGTGAGAGCAACCTTCTACAATCCTCCTTACAACCCTTCTGCTTGTTTTGGGAACAGCAAGATAAATGGAGTGATGATTGCAGCAGCAGGGAGTGACCTATTTAAGAAATCAGTGTGTGGGAAGAAGTTCAGTGTGAAGTGTGTGGGAAAGTCTCATGCTTGCAAGACAAATAAGCCAATTGTTGTCACCTTTGTGGATATGTGTCCTGGCTGTGGAGGCTCCAATATTGACCTCTCAAGAGAAGCCTTTGGCTCCATTGCACATCGCAGTGCCGGAGTTATCGACGTTGAGATACACCCACTTTAA 363 0.4435 MAFFFALSFALVVGHGNKLVRATFYNPPYNPSACFGNSKINGVMIAAAGSDLFKKSVCGKKFSVKCVGKSHACKTNKPIVVTFVDMCPGCGGSNIDLSREAFGSIAHRSAGVIDVEIHPL 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0359 120 Pfam Lytic transglycolase 51 117 IPR009009 -
Sto11g0359 120 Gene3D - 18 118 IPR036908 -
Sto11g0359 120 SMART dpbb_1 45 117 IPR007112 -
Sto11g0359 120 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 10 120 IPR007112 -
Sto11g0359 120 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 6 118 IPR044206 GO:0009627|GO:0048046
Sto11g0359 120 SUPERFAMILY Barwin-like endoglucanases 6 116 IPR036908 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0359 44 111 Expansin Gene Family AT3G60570 42.254 1.39e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0359 - - ccav:112500867 96.6709