Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g0354 ATGGTGCACTTGAGTTGGTCCATCTACAATGGTATGGATGCTGATAATAAAGTTAGGAGGAGAGAGATTCTGGTTAGCCTCTGTGAGCAAAGGGCCAGAATGTTGCAAGATCAATTCAGTGTTAGTGTTAACCATGTTCATGCCTTAGCCATTCTTGTTTCTACCTTCCATTACTACAGATTCCCATCTGCAATTGACCAGGAAACCTTTGCTGAGTACACAGCTAGAACTGCATTTGAGCGGCCATTGCTGAATGGGGTGGCCTATGCACAAAGGGTAGTTGACACTGAAAGAGAAACCTTTGAGAGGCAGCATGGATGGGTGATAAAGACAATGGGAAGGGAGCCTTCTCCGGTCCGAGACGAGTATGCGCCGGTGATATTTTCACAAGAAACTATAGCTTATCTTGAATCTCTTGACATGATGTCAGGGGAGGAGGACCGAGAAAACATTCTGAGGGCTAGGGCCACTGGGAAAGCTGTTCTGACCAGCCCCTTCAGGCTGTTGGGTTCTCATCATCTTGGTGTGGTGTTGACATTCCCTGTTTACAAATCTAAGCTCTCTACAAAGCCTACTGTGGAAGAACGGATTGAGGCAACTGCTGGATATGTTGGAGGATCCTTCGATGTTGAGTCCCTTGTTGAGAATTTACTTGGGCAACTTGCTGGTCACCAAGCAATTTTGGTGCTTATCATAGTATTTCTTGAACAGTGGGACTACATCTTATATGGTGCTGCAATTCATATTGTCAAAGTTGAGGATGATTTCCATGAAATGCAGGAACTAAAAGTCGAGCTGAAGCAGCCGATGTTGCCAAATCCCCTGCAACGGTATCTCATGAAATCAGAACGCAATGAATGGCATCCTAGTGATGCTATTATTGAACTTCGTATCATTGTAGGAATGCTTGGTCTGCTTTTAGATACAGAACTGAGTTCAACTCAACGAGACTATGCTCAGACTGCTCAAGCTTGTGGAAAGGCACTGATAACATTAATAAATGAGGTGCTTGACCGAGCTAAAATTGAAGCTGGCAAGTTAGAGCTGGAAGCAGTTCCATTCGACATTCGTTCCATACTTGATGATgtactttctttattttctgAGAAGTCCAGACACAAAGGCTTAGAGTTGGCAGTCTTTGTTTCTGATAAAGTTCCAGATATTGTTATGGGGGATCCTGGGAGATTCAGACAAATCATAACAAATCTCGTCGGCAACTCTGTTAAATTCACCGAACAAGGCCACATATTTGTCAAGGTCCATCTAGCTGAAAATATAAATACCACAATGAATGGAAAATCTGAGACTTATCTGAATGGAGGATCAGATGATGTTGTGCATAGTCAGTTCAAAACCCTAAGTGGATGTGAAGCGGCCGATGAGCGGAACAGTTGGGATAATTTCAAGCATCTAATAGCTGATGAAGAATTTTGCTTTGAAAAAGTGACCATCATTCAAGCTTCTGAGCTAGTTACTTTGATGGTCTGTGTGGAGGATACTGGAATCGGGATTCCTTTTGCTGCGCAGGACAGGATTTTCATGCCTTTTGTTCAGGCAGACAGCTCAACCTCTCGAAACTATGGTGGAACTGGTATTGGCTTGAGCATCAGTAAGTGTCTGGTTGAGCTAATGGGTGGTCAAATAAACTTCATAAGCCGACCCCAGGTCGGGAGCACGTTTTCCTTCACGGCGAATCTTGGAACATATAAGAAAAATACGGTCAGCGACGCGAAGAAACTTAATGTGGAAGATCTACCTTCTAGTTTTAGAGGACTGAAAATCATAGTGGTTGATGGAAAACCTGTTAGAGCTGCTGTGACTAGATACCATCTGAAGAGACTAGGGATACTGGTTAAAATTGCAAATAATATCAACAAGGCTATTGCTTTATGTGGGAAAAATGGTTCTTTAACATCTGGGTTATTCCAGCCGGATATAATCTTGGTTGAGAAGGACTCGTGGATGATCGGAGACGACGGGAGCTTCAACATATGGCAACTGGACTGGAAACAGAATGGGCATACATTCAAGTTGCCGAAAATGATCCTTCTGGCAACCAATATCAGTAATTCTGAGTTTGATAAAGCGAAGGCTGCAGTTCTCGGCGTCGGGAAGAAGAGGCAACAAGGGAAAGACTTGCCCAACGGTTCCACTTTTCTACAGAGTCTTCTTTGTGGAAAGAAAATTTTGGTGGTCGATGACAATGTGGTAAACCGGAGGGTGGCTGCCGGTGCGTTGAAGAAGTTTGGAGCCGATGTGAAGTGCGTAGATAGCGGCAAAGCTGCGCTCGAAATGCTTCAATTGCCTCATAGTTTTGATGCTTGCTTTATGGACATTCAAATGCCAGAAATGGACGGGTTTGAAGCAACGCGCCGAATCCGGATGATGGAAAGCGCGGCGAATGAGCAGCAGGCGAATGGAGGATCTGTTGAAGGAAATGCACAGAAAACTGAGTGGCATTTACCGATACTAGCAATGACAGCCGATGTGATTCACGCGACCTACGAAGAGTGCCTGAAATGCGGGATGGACGGATACGTGTCGAAGCCATTCGAGGAAGAGAATCTCTACCAAGCAGTTGCAAAGTTCTTCAAATCTAAGCCCATTTCAGACTCATGA 2622 0.4413 MVHLSWSIYNGMDADNKVRRREILVSLCEQRARMLQDQFSVSVNHVHALAILVSTFHYYRFPSAIDQETFAEYTARTAFERPLLNGVAYAQRVVDTERETFERQHGWVIKTMGREPSPVRDEYAPVIFSQETIAYLESLDMMSGEEDRENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLSTKPTVEERIEATAGYVGGSFDVESLVENLLGQLAGHQAILVLIIVFLEQWDYILYGAAIHIVKVEDDFHEMQELKVELKQPMLPNPLQRYLMKSERNEWHPSDAIIELRIIVGMLGLLLDTELSSTQRDYAQTAQACGKALITLINEVLDRAKIEAGKLELEAVPFDIRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIITNLVGNSVKFTEQGHIFVKVHLAENINTTMNGKSETYLNGGSDDVVHSQFKTLSGCEAADERNSWDNFKHLIADEEFCFEKVTIIQASELVTLMVCVEDTGIGIPFAAQDRIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFISRPQVGSTFSFTANLGTYKKNTVSDAKKLNVEDLPSSFRGLKIIVVDGKPVRAAVTRYHLKRLGILVKIANNINKAIALCGKNGSLTSGLFQPDIILVEKDSWMIGDDGSFNIWQLDWKQNGHTFKLPKMILLATNISNSEFDKAKAAVLGVGKKRQQGKDLPNGSTFLQSLLCGKKILVVDDNVVNRRVAAGALKKFGADVKCVDSGKAALEMLQLPHSFDACFMDIQMPEMDGFEATRRIRMMESAANEQQANGGSVEGNAQKTEWHLPILAMTADVIHATYEECLKCGMDGYVSKPFEEENLYQAVAKFFKSKPISDS 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g0354 873 CDD HisKA 295 341 IPR003661 GO:0000155|GO:0007165
Sto11g0354 873 CDD HATPase_EvgS-ArcB-TorS-like 397 567 - -
Sto11g0354 873 Pfam Response regulator receiver domain 730 798 IPR001789 GO:0000160
Sto11g0354 873 SMART CHASE_2 61 245 IPR006189 -
Sto11g0354 873 SUPERFAMILY CheY-like 727 865 IPR011006 -
Sto11g0354 873 ProSiteProfiles Histidine kinase domain profile. 291 569 IPR005467 -
Sto11g0354 873 CDD REC_hyHK_CKI1_RcsC-like 730 861 - -
Sto11g0354 873 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 334 564 IPR036890 -
Sto11g0354 873 ProSiteProfiles Response regulatory domain profile. 729 865 IPR001789 GO:0000160
Sto11g0354 873 SMART HKATPase_4 392 569 IPR003594 -
Sto11g0354 873 Gene3D - 295 343 - -
Sto11g0354 873 PANTHER HISTIDINE KINASE 4 1 230 - -
Sto11g0354 873 PANTHER HISTIDINE KINASE 4 238 869 - -
Sto11g0354 873 Gene3D CHASE domain 65 260 IPR042240 -
Sto11g0354 873 SUPERFAMILY CheY-like 589 662 IPR011006 -
Sto11g0354 873 Gene3D - 344 573 IPR036890 -
Sto11g0354 873 PANTHER TWO-COMPONENT HISTIDINE KINASE 238 869 - -
Sto11g0354 873 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 230 - -
Sto11g0354 873 SMART REC_2 728 861 IPR001789 GO:0000160
Sto11g0354 873 Gene3D - 723 871 - -
Sto11g0354 873 Pfam CHASE domain 64 221 IPR006189 -
Sto11g0354 873 ProSiteProfiles CHASE domain profile. 61 222 IPR006189 -
Sto11g0354 873 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 567 IPR003594 -
Sto11g0354 873 PRINTS Bacterial sensor protein C-terminal signature 494 508 IPR004358 GO:0016310|GO:0016772
Sto11g0354 873 PRINTS Bacterial sensor protein C-terminal signature 512 522 IPR004358 GO:0016310|GO:0016772
Sto11g0354 873 PRINTS Bacterial sensor protein C-terminal signature 529 547 IPR004358 GO:0016310|GO:0016772
Sto11g0354 873 PRINTS Bacterial sensor protein C-terminal signature 553 566 IPR004358 GO:0016310|GO:0016772
Sto11g0354 873 Gene3D - 12 64 - -
Sto11g0354 873 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 296 346 IPR036097 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g0354 Sto-Chr11 4611369 4617774 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g0354 19 873 Miscellaneous Gene Families AT1G27320 48.156 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto11g0354 HATPase_c 9.1e-32 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g0354 K14489 - jre:108993473 1254.97